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The map label for this gene is yxdK [H]

Identifier: 52787822

GI number: 52787822

Start: 3971441

End: 3972421

Strand: Direct

Name: yxdK [H]

Synonym: BLi04145

Alternate gene names: 52787822

Gene position: 3971441-3972421 (Clockwise)

Preceding gene: 52787821

Following gene: 52787823

Centisome position: 94.05

GC content: 43.12

Gene sequence:

>981_bases
ATGAAGCTGTTCCTAAAAAACCATGCCGTTCTCATTTTTCTGTTTCTCTTTCAGGGCGGATTCGTATTTTTTTACTATTG
GTTTGCCGGCATGCAGACTTTCACCCACCTTTTTTACATTCTCGGCGTTCAGCTTCTGGCGCTTGCGCTTTATCTTTCAT
ACAAATGGTATGAAGAACACAGAGTCTACCAATGGATCGGCTCAGATCAAAAAGATACAGAAATTCCTTTTTTGGGGACG
TCTGAATTTTGCTCAGAGCTCTATGAAAAACATATGGAGCTGAGCCGGCTCCACCACCGCAAAATACATGATATGGAGTC
CAAGCTGGAAGATAGGGTAACCTACATGAATCAATGGGTGCATCAGGTGAAAACACCGCTTTCCGTCATCAATCTGATCA
TCCAGGAAGAGGACGAACCCGTTTTTAAACAAATCAAAAAAGAAGTCCAGCAGATTGAATACGGACTGGAGACGCTCCTC
TATTCATCAAGGCTTGACCTGTTTGAAAGAGATTTTAAAATTGAGGCCGTGTCACTAGACGAGCTGCTTAATTCGCTGAT
TCAGCGCTATAAACGCTATTTTATACAGCATCGTGTCTATCCAAATAAACAGGTTCCCGCTGAAGACGCCGTTATTTACT
CCGATCGCAAATGGCTCAGATTTTCCACTGGCCAAGTCATCACTAACGCTGTGAAGTACTCGTCAGGAAGAAGCGAACGC
ATCGATTTGACGATATTCCGTAAAGGCGAACGCATCATTCTGGAAATCAAAGATTACGGAATCGGAATCCCTTCACAAGA
TGTGAAACGCGTATTTGAGCCTTATTACACCGGGGAAAACGGACGGCGCTTTCAGGAATCAACAGGCATCGGCCTCTACC
TTGTAAAAGAGATTGCCGAAAAGCTCAATCATGATGTGAGCATCGATTCAGAAGAAGGAAAAGAAACGACTGTGCAATTT
TCATTTCTTACAAAAATGTAA

Upstream 100 bases:

>100_bases
ATGTCTATATTACAAGGATTCGCAAAAAACTGCGAAGCATGGACGTGCCCTTCTCAATTGAATCTGTGCGGGGCGAAGGG
TATCAGCTGAGGACGAAATC

Downstream 100 bases:

>100_bases
GTCTTCTTTAATAAAACCGCATAGCTCATCCCCATCCTCCTTGATATGATTTGTTTACAAAACAAACGTGGCAAGGAGGA
TTTTTTATAAGCAATCCGAG

Product: YxdK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MKLFLKNHAVLIFLFLFQGGFVFFYYWFAGMQTFTHLFYILGVQLLALALYLSYKWYEEHRVYQWIGSDQKDTEIPFLGT
SEFCSELYEKHMELSRLHHRKIHDMESKLEDRVTYMNQWVHQVKTPLSVINLIIQEEDEPVFKQIKKEVQQIEYGLETLL
YSSRLDLFERDFKIEAVSLDELLNSLIQRYKRYFIQHRVYPNKQVPAEDAVIYSDRKWLRFSTGQVITNAVKYSSGRSER
IDLTIFRKGERIILEIKDYGIGIPSQDVKRVFEPYYTGENGRRFQESTGIGLYLVKEIAEKLNHDVSIDSEEGKETTVQF
SFLTKM

Sequences:

>Translated_326_residues
MKLFLKNHAVLIFLFLFQGGFVFFYYWFAGMQTFTHLFYILGVQLLALALYLSYKWYEEHRVYQWIGSDQKDTEIPFLGT
SEFCSELYEKHMELSRLHHRKIHDMESKLEDRVTYMNQWVHQVKTPLSVINLIIQEEDEPVFKQIKKEVQQIEYGLETLL
YSSRLDLFERDFKIEAVSLDELLNSLIQRYKRYFIQHRVYPNKQVPAEDAVIYSDRKWLRFSTGQVITNAVKYSSGRSER
IDLTIFRKGERIILEIKDYGIGIPSQDVKRVFEPYYTGENGRRFQESTGIGLYLVKEIAEKLNHDVSIDSEEGKETTVQF
SFLTKM
>Mature_326_residues
MKLFLKNHAVLIFLFLFQGGFVFFYYWFAGMQTFTHLFYILGVQLLALALYLSYKWYEEHRVYQWIGSDQKDTEIPFLGT
SEFCSELYEKHMELSRLHHRKIHDMESKLEDRVTYMNQWVHQVKTPLSVINLIIQEEDEPVFKQIKKEVQQIEYGLETLL
YSSRLDLFERDFKIEAVSLDELLNSLIQRYKRYFIQHRVYPNKQVPAEDAVIYSDRKWLRFSTGQVITNAVKYSSGRSER
IDLTIFRKGERIILEIKDYGIGIPSQDVKRVFEPYYTGENGRRFQESTGIGLYLVKEIAEKLNHDVSIDSEEGKETTVQF
SFLTKM

Specific function: Probable member of the two-component regulatory system yxdK/yxdJ. May activate yxdJ in response to the antibacterial protein LL-37 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790861, Length=266, Percent_Identity=26.6917293233083, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 38797; Mature: 38797

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFLKNHAVLIFLFLFQGGFVFFYYWFAGMQTFTHLFYILGVQLLALALYLSYKWYEEH
CEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVYQWIGSDQKDTEIPFLGTSEFCSELYEKHMELSRLHHRKIHDMESKLEDRVTYMNQWV
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQVKTPLSVINLIIQEEDEPVFKQIKKEVQQIEYGLETLLYSSRLDLFERDFKIEAVSLD
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHH
ELLNSLIQRYKRYFIQHRVYPNKQVPAEDAVIYSDRKWLRFSTGQVITNAVKYSSGRSER
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEECHHHHHHHHHHCCCCCCE
IDLTIFRKGERIILEIKDYGIGIPSQDVKRVFEPYYTGENGRRFQESTGIGLYLVKEIAE
EEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHHHH
KLNHDVSIDSEEGKETTVQFSFLTKM
HHCCCCCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MKLFLKNHAVLIFLFLFQGGFVFFYYWFAGMQTFTHLFYILGVQLLALALYLSYKWYEEH
CEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVYQWIGSDQKDTEIPFLGTSEFCSELYEKHMELSRLHHRKIHDMESKLEDRVTYMNQWV
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQVKTPLSVINLIIQEEDEPVFKQIKKEVQQIEYGLETLLYSSRLDLFERDFKIEAVSLD
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHH
ELLNSLIQRYKRYFIQHRVYPNKQVPAEDAVIYSDRKWLRFSTGQVITNAVKYSSGRSER
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEECHHHHHHHHHHCCCCCCE
IDLTIFRKGERIILEIKDYGIGIPSQDVKRVFEPYYTGENGRRFQESTGIGLYLVKEIAE
EEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHHHH
KLNHDVSIDSEEGKETTVQFSFLTKM
HHCCCCCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7952181; 9384377; 8867804 [H]