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The map label for this gene is dgoA [H]

Identifier: 52787748

GI number: 52787748

Start: 3896232

End: 3896858

Strand: Reverse

Name: dgoA [H]

Synonym: BLi04071

Alternate gene names: 52787748

Gene position: 3896858-3896232 (Counterclockwise)

Preceding gene: 52787749

Following gene: 52787747

Centisome position: 92.28

GC content: 51.52

Gene sequence:

>627_bases
ATGATGGTATTGTCACACATCGAAGAACAAAAACTGATTGCGATCATCCGCGGATACAATCCGGAGGAGGCAGTGAGCAT
TGCCGGCGCCTTAAAAGCGGGCGGCATCAGGCTTGTGGAGATTACGCTTAATTCCCCTCAAGCGATCAAAGCGATTGAAG
CGGTTTCAGAGCATTTTGGGGACGAAATGCTTGTCGGAGCGGGAACCGTACTTGATCCCGAATCTGCGAGAGCGGCGCTT
TTAGCCGGCGCGCGGTTTATCCTGTCTCCGACCGTCAATGAAGAGACGATCAAGCTGACAAAACGGTATGGAGCGGTCAG
CATTCCAGGCGCTTTTACCCCGACTGAAATATTGACGGCGTATGAAAGCGGGGGAGACATCATCAAGGTATTTCCCGGAA
CAATGGGGCCTGGCTATATCAAGGATATCCACGGACCGCTTCCGCATATTCCGCTGCTTCCGACTGGAGGAGTCGGATTG
GAAAACCTTCACGAGTTTCTGCAGGCCGGTGCGGTCGGAGCGGGAATCGGCGGTTCGCTTGTTCGGGCTAATAAAGATGT
TAATGACGCGTTTTTAGAAGAGCTGTCCAAAAAAGCAAAGCAATTTGTTGAAGCAGCAAAACAGTAA

Upstream 100 bases:

>100_bases
TGAAGGGCTGCCTGACCGCGAATCACTGTTTGCGTTTATGGAACAATCTGATGAAGAAGATGTCAGCCGATAAAAAAACC
GTAGAGAAAGGGTGGCAGAA

Downstream 100 bases:

>100_bases
AAAGGGGAGATCAGAGATGAAAATAACAGGATTCGAGTGTTTCCTAATTCCGCCGCGCTGGCTTTTCTTAAAAATCGAAA
CGGATGAAGGCATTACAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MMVLSHIEEQKLIAIIRGYNPEEAVSIAGALKAGGIRLVEITLNSPQAIKAIEAVSEHFGDEMLVGAGTVLDPESARAAL
LAGARFILSPTVNEETIKLTKRYGAVSIPGAFTPTEILTAYESGGDIIKVFPGTMGPGYIKDIHGPLPHIPLLPTGGVGL
ENLHEFLQAGAVGAGIGGSLVRANKDVNDAFLEELSKKAKQFVEAAKQ

Sequences:

>Translated_208_residues
MMVLSHIEEQKLIAIIRGYNPEEAVSIAGALKAGGIRLVEITLNSPQAIKAIEAVSEHFGDEMLVGAGTVLDPESARAAL
LAGARFILSPTVNEETIKLTKRYGAVSIPGAFTPTEILTAYESGGDIIKVFPGTMGPGYIKDIHGPLPHIPLLPTGGVGL
ENLHEFLQAGAVGAGIGGSLVRANKDVNDAFLEELSKKAKQFVEAAKQ
>Mature_208_residues
MMVLSHIEEQKLIAIIRGYNPEEAVSIAGALKAGGIRLVEITLNSPQAIKAIEAVSEHFGDEMLVGAGTVLDPESARAAL
LAGARFILSPTVNEETIKLTKRYGAVSIPGAFTPTEILTAYESGGDIIKVFPGTMGPGYIKDIHGPLPHIPLLPTGGVGL
ENLHEFLQAGAVGAGIGGSLVRANKDVNDAFLEELSKKAKQFVEAAKQ

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=199, Percent_Identity=41.2060301507538, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1788156, Length=188, Percent_Identity=34.0425531914894, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 21835; Mature: 21835

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVLSHIEEQKLIAIIRGYNPEEAVSIAGALKAGGIRLVEITLNSPQAIKAIEAVSEHFG
CCCHHHCCHHHEEHEECCCCHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHCC
DEMLVGAGTVLDPESARAALLAGARFILSPTVNEETIKLTKRYGAVSIPGAFTPTEILTA
CCEEECCCCEECCHHHHHHHHHCCHHEECCCCCHHHHHHHHHCCCEECCCCCCHHHHHHH
YESGGDIIKVFPGTMGPGYIKDIHGPLPHIPLLPTGGVGLENLHEFLQAGAVGAGIGGSL
HCCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHH
VRANKDVNDAFLEELSKKAKQFVEAAKQ
EECCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMVLSHIEEQKLIAIIRGYNPEEAVSIAGALKAGGIRLVEITLNSPQAIKAIEAVSEHFG
CCCHHHCCHHHEEHEECCCCHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHCC
DEMLVGAGTVLDPESARAALLAGARFILSPTVNEETIKLTKRYGAVSIPGAFTPTEILTA
CCEEECCCCEECCHHHHHHHHHCCHHEECCCCCHHHHHHHHHCCCEECCCCCCHHHHHHH
YESGGDIIKVFPGTMGPGYIKDIHGPLPHIPLLPTGGVGLENLHEFLQAGAVGAGIGGSL
HCCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHH
VRANKDVNDAFLEELSKKAKQFVEAAKQ
EECCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]