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The map label for this gene is yhjJ [H]

Identifier: 52787622

GI number: 52787622

Start: 3767993

End: 3769039

Strand: Reverse

Name: yhjJ [H]

Synonym: BLi03944

Alternate gene names: 52787622

Gene position: 3769039-3767993 (Counterclockwise)

Preceding gene: 52787623

Following gene: 52787621

Centisome position: 89.26

GC content: 43.27

Gene sequence:

>1047_bases
ATGAAAATCGGAATTATAGGAGCCGGAGGAATTGCAAAAGCCCATGCGAAAGCTCTTTCAACAGTCAAAGGTGCCGAGCT
TTCCGGGTTTTTTGATATCAACTCGCTTGCCTCTCGTAAATGTGCGTTTGAATACGGAGGAACTGCCTTTACCAGTATGC
AGGAGCTGTTGAATCAGTCGACGGCAGTCATCGTTTCATCGCCGAACTTTTGCCATAAAGAACATGCGCTTGAAGCGATG
GCTGCAGGGAAGTATGTATTGTGTGAAAAACCGATGGCTGTCTCAATGGAAGAAGCGGAGGAGATGAAAAGCAGGGCGTC
TCAATCCGCTTATATTCCGATCATGGGCTTCAATTACCGCCATCTCACATTCGTTAAGCGCCTAAAAGATATGATATCCG
GCAATGAACTTGGAGATATTTTGTCCATCAATGTCCATTTTAAGAAAAACAGCGCCTTGAGAAGAAAAAAATATACTTGG
CGCGATCATTCGAAAAGCAACAAAACGAGCGGGGCATTAGGAGATTTGGGCGTGCATTTAATCGATCTCATACTCTATTT
GTTCGACAGCCCGTTTAAACTGGACAGTTTAAAAGTCAAAATGATGACGGTCGTCAAAGAAAAAGAACAAAAACAGGTAT
ATGTTGATGATCATTCAGAAGTATACGGCCAGCTTGAAAATCATGTGTTTGTCAATATGATTACGTCAAAATGCACAAAA
TCGGATGAGTGCGGCTTCAGCATCGAGGTCAACGGCCAAAACGGCGTATTTTACTATCATTCACGGCAGAAAAATCAGTT
TTTGCTGAGGGCCGGATTGACGGAGCAGATGATAACAATGCCGGACACGTGGCTGACAGACCCTGAAAATGAATTTTACG
GATGGGCCGATTCCTTCAGAGTTCAGCTGATCCAATGGATGAACGGAATTCGGGATCGCAATTTTGCATCTCTTGCCACT
TTTGAAGATGGATACAAGACGCAGTTCTACTTAAATGAATTTTTCAATAAAGGTCAGCAGCTGTCCCTTTCAAAACAAGC
AAACTAG

Upstream 100 bases:

>100_bases
GAAGCCAAGTCGCTCCATTCCCGTATGACAGAAGGCAGCTATACGGCTGGAATTTTAGAAGTGCTAAAAGCCCATATCAA
ACGATAAGGAGTGTCCTTAG

Downstream 100 bases:

>100_bases
CATTGCGAAAGACCCTTGCCGGCTGTGCCACCCAAGCCGCAAGGGTTTTATGGTCTGCAACGAAGGAGTGAGTCTAATGA
AAAAAATATTTCTATTCGGC

Product: YhjJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MKIGIIGAGGIAKAHAKALSTVKGAELSGFFDINSLASRKCAFEYGGTAFTSMQELLNQSTAVIVSSPNFCHKEHALEAM
AAGKYVLCEKPMAVSMEEAEEMKSRASQSAYIPIMGFNYRHLTFVKRLKDMISGNELGDILSINVHFKKNSALRRKKYTW
RDHSKSNKTSGALGDLGVHLIDLILYLFDSPFKLDSLKVKMMTVVKEKEQKQVYVDDHSEVYGQLENHVFVNMITSKCTK
SDECGFSIEVNGQNGVFYYHSRQKNQFLLRAGLTEQMITMPDTWLTDPENEFYGWADSFRVQLIQWMNGIRDRNFASLAT
FEDGYKTQFYLNEFFNKGQQLSLSKQAN

Sequences:

>Translated_348_residues
MKIGIIGAGGIAKAHAKALSTVKGAELSGFFDINSLASRKCAFEYGGTAFTSMQELLNQSTAVIVSSPNFCHKEHALEAM
AAGKYVLCEKPMAVSMEEAEEMKSRASQSAYIPIMGFNYRHLTFVKRLKDMISGNELGDILSINVHFKKNSALRRKKYTW
RDHSKSNKTSGALGDLGVHLIDLILYLFDSPFKLDSLKVKMMTVVKEKEQKQVYVDDHSEVYGQLENHVFVNMITSKCTK
SDECGFSIEVNGQNGVFYYHSRQKNQFLLRAGLTEQMITMPDTWLTDPENEFYGWADSFRVQLIQWMNGIRDRNFASLAT
FEDGYKTQFYLNEFFNKGQQLSLSKQAN
>Mature_348_residues
MKIGIIGAGGIAKAHAKALSTVKGAELSGFFDINSLASRKCAFEYGGTAFTSMQELLNQSTAVIVSSPNFCHKEHALEAM
AAGKYVLCEKPMAVSMEEAEEMKSRASQSAYIPIMGFNYRHLTFVKRLKDMISGNELGDILSINVHFKKNSALRRKKYTW
RDHSKSNKTSGALGDLGVHLIDLILYLFDSPFKLDSLKVKMMTVVKEKEQKQVYVDDHSEVYGQLENHVFVNMITSKCTK
SDECGFSIEVNGQNGVFYYHSRQKNQFLLRAGLTEQMITMPDTWLTDPENEFYGWADSFRVQLIQWMNGIRDRNFASLAT
FEDGYKTQFYLNEFFNKGQQLSLSKQAN

Specific function: Part of the ntdABC operon that biosynthesizes the NTD (3,3'-neotrehalosadiamine) antibiotic [H]

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=197, Percent_Identity=30.9644670050761, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081947, Length=198, Percent_Identity=26.2626262626263, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87082405, Length=178, Percent_Identity=25.8426966292135, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39377; Mature: 39377

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIIGAGGIAKAHAKALSTVKGAELSGFFDINSLASRKCAFEYGGTAFTSMQELLNQS
CEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCEEHHCCCHHHHHHHHHHCCC
TAVIVSSPNFCHKEHALEAMAAGKYVLCEKPMAVSMEEAEEMKSRASQSAYIPIMGFNYR
CEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCH
HLTFVKRLKDMISGNELGDILSINVHFKKNSALRRKKYTWRDHSKSNKTSGALGDLGVHL
HHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
IDLILYLFDSPFKLDSLKVKMMTVVKEKEQKQVYVDDHSEVYGQLENHVFVNMITSKCTK
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCEEEEEHHHHCCC
SDECGFSIEVNGQNGVFYYHSRQKNQFLLRAGLTEQMITMPDTWLTDPENEFYGWADSFR
CCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCHHHEECCCCCCCCCCCCCCCCHHHHH
VQLIQWMNGIRDRNFASLATFEDGYKTQFYLNEFFNKGQQLSLSKQAN
HHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCC
>Mature Secondary Structure
MKIGIIGAGGIAKAHAKALSTVKGAELSGFFDINSLASRKCAFEYGGTAFTSMQELLNQS
CEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCEEHHCCCHHHHHHHHHHCCC
TAVIVSSPNFCHKEHALEAMAAGKYVLCEKPMAVSMEEAEEMKSRASQSAYIPIMGFNYR
CEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCH
HLTFVKRLKDMISGNELGDILSINVHFKKNSALRRKKYTWRDHSKSNKTSGALGDLGVHL
HHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
IDLILYLFDSPFKLDSLKVKMMTVVKEKEQKQVYVDDHSEVYGQLENHVFVNMITSKCTK
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCEEEEEHHHHCCC
SDECGFSIEVNGQNGVFYYHSRQKNQFLLRAGLTEQMITMPDTWLTDPENEFYGWADSFR
CCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCHHHEECCCCCCCCCCCCCCCCHHHHH
VQLIQWMNGIRDRNFASLATFEDGYKTQFYLNEFFNKGQQLSLSKQAN
HHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]