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The map label for this gene is atpF

Identifier: 52787608

GI number: 52787608

Start: 3756858

End: 3757376

Strand: Reverse

Name: atpF

Synonym: BLi03930

Alternate gene names: 52787608

Gene position: 3757376-3756858 (Counterclockwise)

Preceding gene: 52787609

Following gene: 52787607

Centisome position: 88.98

GC content: 46.05

Gene sequence:

>519_bases
ATGTCTTTTTTACCACAGGTTATGGGTGCAGGAGTAGGGTTTAACGCCGGAACAATGCTGTTCCAGCTTGTTGCCATGCT
GATTTTGTTAGCGCTCTTGAAGAAATACGCTTTAGGGCCGCTATTAAATATAATGAAAGAGCGTGAAGACTACATTACCG
GAGAGATCTCCTCTGCCGAGAAAAAGAATGAAGAAGCGAAGAAGCTCATTGAGGAGCAGCAGGCGCTTTTGAAAGAAGCA
CGCGAAGAATCCCAGTCTCTGATTGAAAACGCGAAAAAACTGGGTGAACAGCAAAAGGATGAAATCATCAAGGCTGCGCG
CCAGGAAGCAGAACGCATGAAAGAATCAGCCAGAAGCGAGATCGTCAAAGAAAGAGACCAGGCTGTCACCGCGCTGCGCG
AGCAGGTTGCATCATTGTCTGTGATGATCGCTTCTAAAGTAATCGAAAAAGAGCTGGACGAACAAGCCCAGGAAAAATTG
ATCCAAGACTATCTTAAAGAAGTAGGAGAAAGCCGATGA

Upstream 100 bases:

>100_bases
TGTCATAACGGCCGGAAGAATCACCCTCCTGAAAAAAGAGGGAGAACATTTTTCGATGGCCTCGGAGAGATAATCTGCAA
GAAGGGAGTTGCCGTATTCG

Downstream 100 bases:

>100_bases
GCCAATCAGCTGTCTCCAAACGCTACGCAGCCGCTCTGTTTGACATTGCCCTTGAATCCAAGCTGGTCAATGAAATAGAA
GAAGAGCTGACCGTCGTTAA

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSFLPQVMGAGVGFNAGTMLFQLVAMLILLALLKKYALGPLLNIMKEREDYITGEISSAEKKNEEAKKLIEEQQALLKEA
REESQSLIENAKKLGEQQKDEIIKAARQEAERMKESARSEIVKERDQAVTALREQVASLSVMIASKVIEKELDEQAQEKL
IQDYLKEVGESR

Sequences:

>Translated_172_residues
MSFLPQVMGAGVGFNAGTMLFQLVAMLILLALLKKYALGPLLNIMKEREDYITGEISSAEKKNEEAKKLIEEQQALLKEA
REESQSLIENAKKLGEQQKDEIIKAARQEAERMKESARSEIVKERDQAVTALREQVASLSVMIASKVIEKELDEQAQEKL
IQDYLKEVGESR
>Mature_171_residues
SFLPQVMGAGVGFNAGTMLFQLVAMLILLALLKKYALGPLLNIMKEREDYITGEISSAEKKNEEAKKLIEEQQALLKEAR
EESQSLIENAKKLGEQQKDEIIKAARQEAERMKESARSEIVKERDQAVTALREQVASLSVMIASKVIEKELDEQAQEKLI
QDYLKEVGESR

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=155, Percent_Identity=33.5483870967742, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_BACLD (Q65DX0)

Other databases:

- EMBL:   CP000002
- EMBL:   AE017333
- RefSeq:   YP_081008.2
- RefSeq:   YP_093437.1
- ProteinModelPortal:   Q65DX0
- SMR:   Q65DX0
- STRING:   Q65DX0
- EnsemblBacteria:   EBBACT00000055285
- EnsemblBacteria:   EBBACT00000059727
- GeneID:   3027740
- GeneID:   3101262
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi03930
- KEGG:   bli:BL03996
- NMPDR:   fig|279010.5.peg.4015
- eggNOG:   COG0711
- GeneTree:   EBGT00050000001797
- HOGENOM:   HBG617328
- ProtClustDB:   PRK05759
- BioCyc:   BLIC279010-1:BLI03930-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19368; Mature: 19236

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13243530)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLPQVMGAGVGFNAGTMLFQLVAMLILLALLKKYALGPLLNIMKEREDYITGEISSAE
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KKNEEAKKLIEEQQALLKEAREESQSLIENAKKLGEQQKDEIIKAARQEAERMKESARSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVKERDQAVTALREQVASLSVMIASKVIEKELDEQAQEKLIQDYLKEVGESR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure 
SFLPQVMGAGVGFNAGTMLFQLVAMLILLALLKKYALGPLLNIMKEREDYITGEISSAE
CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KKNEEAKKLIEEQQALLKEAREESQSLIENAKKLGEQQKDEIIKAARQEAERMKESARSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVKERDQAVTALREQVASLSVMIASKVIEKELDEQAQEKLIQDYLKEVGESR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA