| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is yvyE [H]
Identifier: 52787475
GI number: 52787475
Start: 3612806
End: 3613444
Strand: Direct
Name: yvyE [H]
Synonym: BLi03795
Alternate gene names: 52787475
Gene position: 3612806-3613444 (Clockwise)
Preceding gene: 52787436
Following gene: 52787476
Centisome position: 85.56
GC content: 44.6
Gene sequence:
>639_bases ATGCTGCAAAGCTATCTGACTGTTGCAGGTGAAGGGACCCATGAAATCGTGATTGAAAAATCCCGGTTTATATGCCACTT GAGCCGCGTCAGTACTGAAGAAGAAGCACAGAACTTTATCAACCACATAAAAAAGCAGCATTGGAATGCGACGCATAATT GCTCGGCTTACGTCATAGGAGAAAATGATCAAATTCAAAAAGCGAATGACGACGGAGAACCGAGCGGGACAGCGGGCGTA CCGATGCTTGAAGTTTTGAAGAAACGCAACCTTAAAGATACATGCGCCGTTGTGACGAGATATTTCGGCGGCATTAAACT CGGCGCAGGAGGATTGATAAGGGCTTACGGAAAATCCGTGTCAGAGGGGCTGAACCATGTCGGCGTTGTCGAACTAAAGC TGATGCGGGTCATGCACACCACTGTGAACTATACATGGATCGGCAAGCTTGAAAACGAGCTTCGCGAGTCCCCTTATCAA ATAAAAGACGTTCACTATGCAGACGATGTCGAATTTGAAACGTATGTCAAGGAAAGCGAAAAACAGGCATTTACGGAATG GATAACCGAATTAACAAATGGCAAGAGTGAGAATAGAGAAGGCATTCAAGTCTATTTGGAAGAAGCTTTTAATAATTAA
Upstream 100 bases:
>100_bases CGATCCATTTCTATTTAATCATAACAAAATACGCGCCAAAATTCTAAGTCTGTTCGATTTTTAGGAGAACAGCCGCAGGC TTGTCAGGAGGTAAGCAGGC
Downstream 100 bases:
>100_bases AGGAGAATCATCTTATGGCTGAGCGTATTAAAGTGAAAGTGCGGAAAAAAAAGAATAAAAAGAGAAGGCTGATTAAACGG TTTATAGTCCTTATGCTGCT
Product: YvyE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MLQSYLTVAGEGTHEIVIEKSRFICHLSRVSTEEEAQNFINHIKKQHWNATHNCSAYVIGENDQIQKANDDGEPSGTAGV PMLEVLKKRNLKDTCAVVTRYFGGIKLGAGGLIRAYGKSVSEGLNHVGVVELKLMRVMHTTVNYTWIGKLENELRESPYQ IKDVHYADDVEFETYVKESEKQAFTEWITELTNGKSENREGIQVYLEEAFNN
Sequences:
>Translated_212_residues MLQSYLTVAGEGTHEIVIEKSRFICHLSRVSTEEEAQNFINHIKKQHWNATHNCSAYVIGENDQIQKANDDGEPSGTAGV PMLEVLKKRNLKDTCAVVTRYFGGIKLGAGGLIRAYGKSVSEGLNHVGVVELKLMRVMHTTVNYTWIGKLENELRESPYQ IKDVHYADDVEFETYVKESEKQAFTEWITELTNGKSENREGIQVYLEEAFNN >Mature_212_residues MLQSYLTVAGEGTHEIVIEKSRFICHLSRVSTEEEAQNFINHIKKQHWNATHNCSAYVIGENDQIQKANDDGEPSGTAGV PMLEVLKKRNLKDTCAVVTRYFGGIKLGAGGLIRAYGKSVSEGLNHVGVVELKLMRVMHTTVNYTWIGKLENELRESPYQ IKDVHYADDVEFETYVKESEKQAFTEWITELTNGKSENREGIQVYLEEAFNN
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=128, Percent_Identity=42.1875, Blast_Score=84, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 23999; Mature: 23999
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00910 UPF0029
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQSYLTVAGEGTHEIVIEKSRFICHLSRVSTEEEAQNFINHIKKQHWNATHNCSAYVIG CCCCCEEECCCCCEEEEEECCHHEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEC ENDQIQKANDDGEPSGTAGVPMLEVLKKRNLKDTCAVVTRYFGGIKLGAGGLIRAYGKSV CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCEEECCCCHHHHHHHHH SEGLNHVGVVELKLMRVMHTTVNYTWIGKLENELRESPYQIKDVHYADDVEFETYVKESE HHHHCCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH KQAFTEWITELTNGKSENREGIQVYLEEAFNN HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLQSYLTVAGEGTHEIVIEKSRFICHLSRVSTEEEAQNFINHIKKQHWNATHNCSAYVIG CCCCCEEECCCCCEEEEEECCHHEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEC ENDQIQKANDDGEPSGTAGVPMLEVLKKRNLKDTCAVVTRYFGGIKLGAGGLIRAYGKSV CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCEEECCCCHHHHHHHHH SEGLNHVGVVELKLMRVMHTTVNYTWIGKLENELRESPYQIKDVHYADDVEFETYVKESE HHHHCCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH KQAFTEWITELTNGKSENREGIQVYLEEAFNN HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]