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The map label for this gene is yvzC [H]

Identifier: 52787330

GI number: 52787330

Start: 3474141

End: 3474371

Strand: Reverse

Name: yvzC [H]

Synonym: BLi03645

Alternate gene names: 52787330

Gene position: 3474371-3474141 (Counterclockwise)

Preceding gene: 52787333

Following gene: 52787329

Centisome position: 82.28

GC content: 36.36

Gene sequence:

>231_bases
ATGGTAAAAAAGATTCATATCAAAAGAGATTTTGTTCTCCAGTACATGATTGAACACAATCTCTCCTTAAATCAGCTTGC
CATTGAAATCGGCGTATCCCCGGCGACACTCAGCAGAGTTTTAAATGGCGAAAGGAGGCCCGGACAACTTGTGATCGGAA
AGATGATTCAGTATTTCAACAAAAAATTTGAAGATCTCTTTTATTATAAAGATGTTGACAAAAGTCAATAA

Upstream 100 bases:

>100_bases
AGGAAACATATGGATGGTAAAAGTATTGACAAAAGTTAACAAATCGTATATGTTCAATGTAGATAAAAAGAAACATAAGA
GATTAGAAAGGGGAGTAATC

Downstream 100 bases:

>100_bases
AGAAAGGAGAAAAGGAGGCTTTTCAAACGTGAAAAATACCGGGATTGTCCGGAGAATCGATGAGCTCGGCAGAGTCGTTC
TCCCGGTCGAAATGCGCAGG

Product: YvzC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MVKKIHIKRDFVLQYMIEHNLSLNQLAIEIGVSPATLSRVLNGERRPGQLVIGKMIQYFNKKFEDLFYYKDVDKSQ

Sequences:

>Translated_76_residues
MVKKIHIKRDFVLQYMIEHNLSLNQLAIEIGVSPATLSRVLNGERRPGQLVIGKMIQYFNKKFEDLFYYKDVDKSQ
>Mature_76_residues
MVKKIHIKRDFVLQYMIEHNLSLNQLAIEIGVSPATLSRVLNGERRPGQLVIGKMIQYFNKKFEDLFYYKDVDKSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8958; Mature: 8958

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKIHIKRDFVLQYMIEHNLSLNQLAIEIGVSPATLSRVLNGERRPGQLVIGKMIQYFN
CCCEECCHHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHH
KKFEDLFYYKDVDKSQ
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVKKIHIKRDFVLQYMIEHNLSLNQLAIEIGVSPATLSRVLNGERRPGQLVIGKMIQYFN
CCCEECCHHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHH
KKFEDLFYYKDVDKSQ
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]