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The map label for this gene is abh [H]

Identifier: 52787329

GI number: 52787329

Start: 3473828

End: 3474112

Strand: Reverse

Name: abh [H]

Synonym: BLi03644

Alternate gene names: 52787329

Gene position: 3474112-3473828 (Counterclockwise)

Preceding gene: 52787330

Following gene: 52787328

Centisome position: 82.27

GC content: 49.12

Gene sequence:

>285_bases
GTGAAAAATACCGGGATTGTCCGGAGAATCGATGAGCTCGGCAGAGTCGTTCTCCCGGTCGAAATGCGCAGGGTGCTGAA
TATCAATGAAAAGGACCCGCTCGAAATATATACCGACGGCGAAAACATCATTTTGACAAAATACGCCGCAAACATGGCAT
GTTTGATGACCGGCGACATCACCACGAAAAATAAAACGTATGCGGGCGGCAAAATCGTACTCAGCCCGCGCGGAGCGGAA
ATGCTCCTGGAAGATATGATGGCGGCACTGTCAGAAAAGAAATAA

Upstream 100 bases:

>100_bases
AAGATGATTCAGTATTTCAACAAAAAATTTGAAGATCTCTTTTATTATAAAGATGTTGACAAAAGTCAATAAAGAAAGGA
GAAAAGGAGGCTTTTCAAAC

Downstream 100 bases:

>100_bases
ATGTGATTACATATTCCGCAGGAAAGGGAGCAGAGCCGCTCTCTTTTTTTGTATACCTTATTCCGGCGCTGGGAAAAAAT
AAAAAAAGCTGTTCGAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDITTKNKTYAGGKIVLSPRGAE
MLLEDMMAALSEKK

Sequences:

>Translated_94_residues
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDITTKNKTYAGGKIVLSPRGAE
MLLEDMMAALSEKK
>Mature_94_residues
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDITTKNKTYAGGKIVLSPRGAE
MLLEDMMAALSEKK

Specific function: Unknown

COG id: COG2002

COG function: function code K; Regulators of stationary/sporulation gene expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis AbrB and SpoVT [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006339
- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 10487; Mature: 10487

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
7.4 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDI
CCCCHHHHHHHHCCCEEECHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCEEEEEECCC
TTKNKTYAGGKIVLSPRGAEMLLEDMMAALSEKK
CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDI
CCCCHHHHHHHHCCCEEECHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCEEEEEECCC
TTKNKTYAGGKIVLSPRGAEMLLEDMMAALSEKK
CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002615; 8969500; 9384377 [H]