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The map label for this gene is xpaF1 [H]

Identifier: 52787287

GI number: 52787287

Start: 3433501

End: 3433770

Strand: Reverse

Name: xpaF1 [H]

Synonym: BLi03600

Alternate gene names: 52787287

Gene position: 3433770-3433501 (Counterclockwise)

Preceding gene: 52787288

Following gene: 52787286

Centisome position: 81.32

GC content: 44.07

Gene sequence:

>270_bases
ATGCATCAAACAAATGAATGGGACGTCTTCAAGCAGGAGATTACCGAATTGAAGGCCGATCACAAAACGCTTGAACAGCG
TGTCATCACACTGGAAAGGGCGTCTGATCGACACGATCAACAGATTATGTCCATCAATGACAAGCTCAACAAGATTGAAG
AGAACACAACATGGATTAAGCGCAGCATAACGGGCGCGATCATCACAGCGGTTTGTACACTGGTGATCTCCGGGATTGCG
GCGCTTTTCATTAATTTTATTCAAAAATAA

Upstream 100 bases:

>100_bases
ACACTAGTGTGGATTTAGGAATGCCAAGCGCCCAATAAGGGTGTTTTTATTTTGCCTCGAGGGAGGTGAAAACGATGTGA
GAACAGGAGGATTTCAGGAC

Downstream 100 bases:

>100_bases
GGAGGAAGACACAATATGACAACATTCGACAAAGGCACGGTCGTTCGGACGGTGCTTCTTTTTATTGCGTTGGTAAACCA
GACTTTGATCGTATTCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MHQTNEWDVFKQEITELKADHKTLEQRVITLERASDRHDQQIMSINDKLNKIEENTTWIKRSITGAIITAVCTLVISGIA
ALFINFIQK

Sequences:

>Translated_89_residues
MHQTNEWDVFKQEITELKADHKTLEQRVITLERASDRHDQQIMSINDKLNKIEENTTWIKRSITGAIITAVCTLVISGIA
ALFINFIQK
>Mature_89_residues
MHQTNEWDVFKQEITELKADHKTLEQRVITLERASDRHDQQIMSINDKLNKIEENTTWIKRSITGAIITAVCTLVISGIA
ALFINFIQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.licheniformis xpaL1 and to B.subtilis xhlA [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019715 [H]

Pfam domain/function: PF10779 XhlA [H]

EC number: NA

Molecular weight: Translated: 10295; Mature: 10295

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQTNEWDVFKQEITELKADHKTLEQRVITLERASDRHDQQIMSINDKLNKIEENTTWIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RSITGAIITAVCTLVISGIAALFINFIQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MHQTNEWDVFKQEITELKADHKTLEQRVITLERASDRHDQQIMSINDKLNKIEENTTWIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RSITGAIITAVCTLVISGIAALFINFIQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7902527 [H]