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The map label for this gene is xpaL2 [H]

Identifier: 52787286

GI number: 52787286

Start: 3433222

End: 3433485

Strand: Reverse

Name: xpaL2 [H]

Synonym: BLi03599

Alternate gene names: 52787286

Gene position: 3433485-3433222 (Counterclockwise)

Preceding gene: 52787287

Following gene: 52787285

Centisome position: 81.31

GC content: 44.32

Gene sequence:

>264_bases
ATGACAACATTCGACAAAGGCACGGTCGTTCGGACGGTGCTTCTTTTTATTGCGTTGGTAAACCAGACTTTGATCGTATT
CGGGAAGCCAGTTCTTCCAATCAGTGAAGATCAGATCAACACGCTCGCAGACGCTTTGTATTTGGCCGGCTCTGCGGCAT
TCACCATCATTACGTCTGTGGTCGCTTGGTTCAAAAATAACTATGTCACTGGCAAAGGAAAGCAGCAAAAAGAAGTTCTA
AAACAAAAAGGGTTAACGAAATGA

Upstream 100 bases:

>100_bases
CATAACGGGCGCGATCATCACAGCGGTTTGTACACTGGTGATCTCCGGGATTGCGGCGCTTTTCATTAATTTTATTCAAA
AATAAGGAGGAAGACACAAT

Downstream 100 bases:

>100_bases
GGTTGCCGGCTGGCAGCCTTTTTTATTTAAAACAAAATAGGAGTGGTTCAGATGGTTAAAGTTGTGAAGAATTATGTGAA
AGTCAATCAATATACTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MTTFDKGTVVRTVLLFIALVNQTLIVFGKPVLPISEDQINTLADALYLAGSAAFTIITSVVAWFKNNYVTGKGKQQKEVL
KQKGLTK

Sequences:

>Translated_87_residues
MTTFDKGTVVRTVLLFIALVNQTLIVFGKPVLPISEDQINTLADALYLAGSAAFTIITSVVAWFKNNYVTGKGKQQKEVL
KQKGLTK
>Mature_86_residues
TTFDKGTVVRTVLLFIALVNQTLIVFGKPVLPISEDQINTLADALYLAGSAAFTIITSVVAWFKNNYVTGKGKQQKEVLK
QKGLTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SPP1 holin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006479
- ProDom:   PD008023 [H]

Pfam domain/function: PF04688 Phage_holin [H]

EC number: NA

Molecular weight: Translated: 9516; Mature: 9385

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFDKGTVVRTVLLFIALVNQTLIVFGKPVLPISEDQINTLADALYLAGSAAFTIITSV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
VAWFKNNYVTGKGKQQKEVLKQKGLTK
HHHHHCCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
TTFDKGTVVRTVLLFIALVNQTLIVFGKPVLPISEDQINTLADALYLAGSAAFTIITSV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
VAWFKNNYVTGKGKQQKEVLKQKGLTK
HHHHHCCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2033382 [H]