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The map label for this gene is yvqH [H]

Identifier: 52787187

GI number: 52787187

Start: 3336094

End: 3336777

Strand: Reverse

Name: yvqH [H]

Synonym: BLi03496

Alternate gene names: 52787187

Gene position: 3336777-3336094 (Counterclockwise)

Preceding gene: 52787188

Following gene: 52787186

Centisome position: 79.02

GC content: 44.59

Gene sequence:

>684_bases
ATGGCTTTAAAAAGAATCAGAGACATGTTTGTCGCATCAGTAAATGAAGGATTGGATAAACTGGAGAACCCACGGGTGAT
GCTGAATCAATACGTACGCGACATGGAAAGCGATATCGCCAAGGCGAAGCATACCATCGTCAAGCAGCAGACAATTGAAC
ATAGTTTTAAAGGAAAAGTGGAAGAAGCCGAAAAGCTTGCTGTCAAGCGAAGAAACCAGGCTCAGCTCGCTTTTGATGCG
GGTGAAGAAGAACTTGCTAAAAAGGCGCTCTCAGAAATGAAGTATTTTGAAGAAAAAGCTGCTGAATACAAGGACGCTCA
CCAGCACGCGAAAAAGCAGCTTGCTGAATTAAAGGAACAGCTGGAGACACTTGAGGTTAAACTGCGCGATATCAAAGACC
GAAAGCATGCGCTGATCGCCAGGGCAAACGCGGTGAAAGCGAAAGAACATATGAATGCATCATTTAATAAAATCGACAGC
GAAAGCGCCTACCGGGAATTTATGAGAATGGAAAACCGGATTGAAGAGATGGAAACAAGGGTGAACAGCTATGCTGAATT
ATCAGCTTCATCAAGCAGCCCATTCGGCCGCCTTGAATATGCAAAAGAAGTGGAAGAAGAGCTGGAAAAAATGAGGGCTA
AAAAGACAGGCTTGGAAAAGCAGACACCTGCGGGAAATGCATAA

Upstream 100 bases:

>100_bases
AGAAAACGGAGCCTTCCGCAGCTTCATATGACACAGGCTTTGATGCAGAGTGGGAAGACTTTTTGAAAAAGAATAAATAA
TATTTTAGGAGGACGAGATC

Downstream 100 bases:

>100_bases
ACGAATAGGGGCTCTCACAGCCCCTTATGCAATTTTTGATTTCTTTCAAAGACCATTTTCCTTATAATAAGGAGCATACA
CTTACTAGCCGAAAGGGTTT

Product: YvqH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MALKRIRDMFVASVNEGLDKLENPRVMLNQYVRDMESDIAKAKHTIVKQQTIEHSFKGKVEEAEKLAVKRRNQAQLAFDA
GEEELAKKALSEMKYFEEKAAEYKDAHQHAKKQLAELKEQLETLEVKLRDIKDRKHALIARANAVKAKEHMNASFNKIDS
ESAYREFMRMENRIEEMETRVNSYAELSASSSSPFGRLEYAKEVEEELEKMRAKKTGLEKQTPAGNA

Sequences:

>Translated_227_residues
MALKRIRDMFVASVNEGLDKLENPRVMLNQYVRDMESDIAKAKHTIVKQQTIEHSFKGKVEEAEKLAVKRRNQAQLAFDA
GEEELAKKALSEMKYFEEKAAEYKDAHQHAKKQLAELKEQLETLEVKLRDIKDRKHALIARANAVKAKEHMNASFNKIDS
ESAYREFMRMENRIEEMETRVNSYAELSASSSSPFGRLEYAKEVEEELEKMRAKKTGLEKQTPAGNA
>Mature_226_residues
ALKRIRDMFVASVNEGLDKLENPRVMLNQYVRDMESDIAKAKHTIVKQQTIEHSFKGKVEEAEKLAVKRRNQAQLAFDAG
EEELAKKALSEMKYFEEKAAEYKDAHQHAKKQLAELKEQLETLEVKLRDIKDRKHALIARANAVKAKEHMNASFNKIDSE
SAYREFMRMENRIEEMETRVNSYAELSASSSSPFGRLEYAKEVEEELEKMRAKKTGLEKQTPAGNA

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 26151; Mature: 26020

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKRIRDMFVASVNEGLDKLENPRVMLNQYVRDMESDIAKAKHTIVKQQTIEHSFKGKV
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EEAEKLAVKRRNQAQLAFDAGEEELAKKALSEMKYFEEKAAEYKDAHQHAKKQLAELKEQ
HHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LETLEVKLRDIKDRKHALIARANAVKAKEHMNASFNKIDSESAYREFMRMENRIEEMETR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
VNSYAELSASSSSPFGRLEYAKEVEEELEKMRAKKTGLEKQTPAGNA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ALKRIRDMFVASVNEGLDKLENPRVMLNQYVRDMESDIAKAKHTIVKQQTIEHSFKGKV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EEAEKLAVKRRNQAQLAFDAGEEELAKKALSEMKYFEEKAAEYKDAHQHAKKQLAELKEQ
HHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LETLEVKLRDIKDRKHALIARANAVKAKEHMNASFNKIDSESAYREFMRMENRIEEMETR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
VNSYAELSASSSSPFGRLEYAKEVEEELEKMRAKKTGLEKQTPAGNA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]