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The map label for this gene is yurR [H]

Identifier: 52787135

GI number: 52787135

Start: 3288000

End: 3289169

Strand: Reverse

Name: yurR [H]

Synonym: BLi03443

Alternate gene names: 52787135

Gene position: 3289169-3288000 (Counterclockwise)

Preceding gene: 52787136

Following gene: 52787134

Centisome position: 77.89

GC content: 54.27

Gene sequence:

>1170_bases
GTGATCCGTTATATTTGTAGAATAAACAGAAATGAAAAAGGTGTTAGTCATGAAATCTTTTATTGTAGTCGGAGCGGCAT
CCTCGGCGCTTCAGCCGCTTATCATATTGCAAAAAAGGGCGCGGATGTGACATTGATTGACCGCGGAGAGCGGGGAAGGG
CTACAGATGCCGCGGCTGGAATCGTCTGCCCCTGGCTTTCGCAGCGCAGGAACCAGGCATGGTACAAGCTTGCAAAAGGC
GGTGCGGCGTACTATGCCGATTTAATCAAGCAGCTTGAAGCTGACGGAGAATCGGATACGGGGTATAAACGGACAGGCGC
TATCAGCTTGCATACAGACGAGCGAAAGCTGGAGAAAATGGAAGAACGGGCGCATCTAAGGCGCAAGGATGCGCCCGAAA
TCGGCGAGATCACCCGGTTATCCCATGAGGAAACGAAGCGTTTATTTCCGCCTTTGGCAGAGGGGTACAGCTCGGTTCAT
ATCAGCGGAGCCGCGCGCGTGAATGGAAAATTGCTGCGCCGCTCACTTGTGAATGCCGCAAAAAAATACGGAGCTTCTGT
TGTTTCAGGAAACGCTTCATTGCTCTATGAAGGAAACCGGGTAACAGGGATCTCCACAGGGGGCAAGAAAATATACGCTG
ATCAGGTGCTTGTCACAGCGGGAGCTTGGGCGGACGAGCTCTTGAAGCCGCTCGGCGTTCGTTTTTCAGTCAGCTACCAA
AAAGCGCAGATCGTCCACCTTTGTCTTCCTGATGCCGATACCGGCAGCTGGCCTGTTGTGATGCCTCCGAATGACCAATA
CATACTGGCATTTGAAGACGGCCGGATCGTTGCCGGCGCTACTCACGAAAATGAAGCGGAACTGGACGATCTTCGGGTAA
CGGCCGGCGGCCTTCACGAAATTTTCTCAAAGGCGCTCGCCGTTGCGCCGGGGTTGGAATTGAGCGAGCTGCTTGAGGCG
CGCGTAGGCTTCAGGCCGTTTACACCGGGCTTTCTCCCCGTGATCGGCTCATTGCCGAACATTTGCGGGCTCCTCGTTGC
CAACGGTCTCGGCGCTTCAGGGCTTACGTCAGGTCCGTACCTTGGCGCTGAATTGGCAAGGCTCGCTTTGGGAGAAGAGC
CTGAGCTTGATATCGCTTTATATGATCCGGCCGGCGCGCTTGAAAGTTGA

Upstream 100 bases:

>100_bases
CTTTTGTCCGAAGGTTTCGGACGACTGAGGATCATCGCGGCTGCCTTAATGGTGCTTGGCGTGATATCGGTAGCCGCTGG
TTAGGTTGTGCTCCATCGGT

Downstream 100 bases:

>100_bases
ATCAACGTGCAGAAAAAAGTTCACTCTAGCTTCGAGTGAACTTTTTTCTTGTTTACAGTTTTAAAATAGAATATTGTTCA
ATATAAATTCATGGAGTAAA

Product: YurR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MIRYICRINRNEKGVSHEIFYCSRSGILGASAAYHIAKKGADVTLIDRGERGRATDAAAGIVCPWLSQRRNQAWYKLAKG
GAAYYADLIKQLEADGESDTGYKRTGAISLHTDERKLEKMEERAHLRRKDAPEIGEITRLSHEETKRLFPPLAEGYSSVH
ISGAARVNGKLLRRSLVNAAKKYGASVVSGNASLLYEGNRVTGISTGGKKIYADQVLVTAGAWADELLKPLGVRFSVSYQ
KAQIVHLCLPDADTGSWPVVMPPNDQYILAFEDGRIVAGATHENEAELDDLRVTAGGLHEIFSKALAVAPGLELSELLEA
RVGFRPFTPGFLPVIGSLPNICGLLVANGLGASGLTSGPYLGAELARLALGEEPELDIALYDPAGALES

Sequences:

>Translated_389_residues
MIRYICRINRNEKGVSHEIFYCSRSGILGASAAYHIAKKGADVTLIDRGERGRATDAAAGIVCPWLSQRRNQAWYKLAKG
GAAYYADLIKQLEADGESDTGYKRTGAISLHTDERKLEKMEERAHLRRKDAPEIGEITRLSHEETKRLFPPLAEGYSSVH
ISGAARVNGKLLRRSLVNAAKKYGASVVSGNASLLYEGNRVTGISTGGKKIYADQVLVTAGAWADELLKPLGVRFSVSYQ
KAQIVHLCLPDADTGSWPVVMPPNDQYILAFEDGRIVAGATHENEAELDDLRVTAGGLHEIFSKALAVAPGLELSELLEA
RVGFRPFTPGFLPVIGSLPNICGLLVANGLGASGLTSGPYLGAELARLALGEEPELDIALYDPAGALES
>Mature_389_residues
MIRYICRINRNEKGVSHEIFYCSRSGILGASAAYHIAKKGADVTLIDRGERGRATDAAAGIVCPWLSQRRNQAWYKLAKG
GAAYYADLIKQLEADGESDTGYKRTGAISLHTDERKLEKMEERAHLRRKDAPEIGEITRLSHEETKRLFPPLAEGYSSVH
ISGAARVNGKLLRRSLVNAAKKYGASVVSGNASLLYEGNRVTGISTGGKKIYADQVLVTAGAWADELLKPLGVRFSVSYQ
KAQIVHLCLPDADTGSWPVVMPPNDQYILAFEDGRIVAGATHENEAELDDLRVTAGGLHEIFSKALAVAPGLELSELLEA
RVGFRPFTPGFLPVIGSLPNICGLLVANGLGASGLTSGPYLGAELARLALGEEPELDIALYDPAGALES

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI194306651, Length=387, Percent_Identity=25.3229974160207, Blast_Score=70, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71994045, Length=390, Percent_Identity=22.5641025641026, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71994052, Length=396, Percent_Identity=22.4747474747475, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 41854; Mature: 41854

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRYICRINRNEKGVSHEIFYCSRSGILGASAAYHIAKKGADVTLIDRGERGRATDAAAG
CEEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
IVCPWLSQRRNQAWYKLAKGGAAYYADLIKQLEADGESDTGYKRTGAISLHTDERKLEKM
EECHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEECEEEEECCHHHHHHH
EERAHLRRKDAPEIGEITRLSHEETKRLFPPLAEGYSSVHISGAARVNGKLLRRSLVNAA
HHHHHHHCCCCCCHHHHHHCCHHHHHHHCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
KKYGASVVSGNASLLYEGNRVTGISTGGKKIYADQVLVTAGAWADELLKPLGVRFSVSYQ
HHHCCEEEECCEEEEEECCEEEEECCCCCEEEECEEEEEECCCHHHHHHHHCCEEEEEEC
KAQIVHLCLPDADTGSWPVVMPPNDQYILAFEDGRIVAGATHENEAELDDLRVTAGGLHE
CEEEEEEECCCCCCCCCEEEECCCCCEEEEEECCEEEEECCCCCCCCHHHEEECCCHHHH
IFSKALAVAPGLELSELLEARVGFRPFTPGFLPVIGSLPNICGLLVANGLGASGLTSGPY
HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
LGAELARLALGEEPELDIALYDPAGALES
HHHHHHHHHCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MIRYICRINRNEKGVSHEIFYCSRSGILGASAAYHIAKKGADVTLIDRGERGRATDAAAG
CEEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
IVCPWLSQRRNQAWYKLAKGGAAYYADLIKQLEADGESDTGYKRTGAISLHTDERKLEKM
EECHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEECEEEEECCHHHHHHH
EERAHLRRKDAPEIGEITRLSHEETKRLFPPLAEGYSSVHISGAARVNGKLLRRSLVNAA
HHHHHHHCCCCCCHHHHHHCCHHHHHHHCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
KKYGASVVSGNASLLYEGNRVTGISTGGKKIYADQVLVTAGAWADELLKPLGVRFSVSYQ
HHHCCEEEECCEEEEEECCEEEEECCCCCEEEECEEEEEECCCHHHHHHHHCCEEEEEEC
KAQIVHLCLPDADTGSWPVVMPPNDQYILAFEDGRIVAGATHENEAELDDLRVTAGGLHE
CEEEEEEECCCCCCCCCEEEECCCCCEEEEEECCEEEEECCCCCCCCHHHEEECCCHHHH
IFSKALAVAPGLELSELLEARVGFRPFTPGFLPVIGSLPNICGLLVANGLGASGLTSGPY
HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
LGAELARLALGEEPELDIALYDPAGALES
HHHHHHHHHCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]