| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is yurG [H]
Identifier: 52787126
GI number: 52787126
Start: 3277346
End: 3278572
Strand: Reverse
Name: yurG [H]
Synonym: BLi03434
Alternate gene names: 52787126
Gene position: 3278572-3277346 (Counterclockwise)
Preceding gene: 52787127
Following gene: 52787125
Centisome position: 77.64
GC content: 52.57
Gene sequence:
>1227_bases ATGACAATTGGCGAAATGAATATTCCGAAACGGACAATTATGACTCCCGGTCCTGTCGAGGTTCATCCGAGAGTGCTGAG GGCGCTTTCCTCACCTGTACTGGGACAGTTCGATCCTGCATTTACAGACATGATGAACGACGTCATGGCGCTGCTTCGGC AGATTTTCCGAACGACAAATAAATGGGCATTCCCGATAGACGGGACATCGCGGGCCGGGCTTGAAGCCGTCCTTGCCAGT CTCATCAAACCGGGGGACAGGGTGCTCATTCCCATTTTCGGACGGTTCGGCTATCTGCTTGCCGAGATTTGCGAACGGTA CCAGGCTGATGTTTATACAATGGAATGCCCGTGGGGAGACGTTTTTGAACCGAAAGAGGTCATCTCCGAAATCAAACGGA CGAAACCGGAGATTGTTGCGGTTGTGCACGGCGAGACATCGACGGGATGCATTCAGCCGCTCGAAGAAATTGGCCGGGCC TGCCGGGAGCTTGATGTGCTTTGTGTAGTCGATGCGGTGGCTACAATCGGCGGCACGGATGTCAATACGGATGAATGGTG TCTTGACGCGGTCGTCGGCGGTACGCAAAAGTGTTTATCCGTTCCTTCAGGTATGGCGCCGATCACATTTAACAGCCGGG TTGAAAAGCGCATCAATGAAAGGAAAAAGGTAGAACGGGGCATTGCCACAAGAGAAGATATCGTGCTTGAAACGGGACGC TTGCCGATTTCCAGCAATTATTTTGACCTCGGCATGCTGATGGATTATTGGAGCCCGAGGCGCCTTAATCATCATACAGA AGCGACTTCGATGCTGTACGGCTTGCGCGAAGGAGCGCGGGTCGTTCTTGAGGAAGGGCTCCGCGAGCGATTCTCAAGAC ACCGGCTCCATGAAACAGCACTAATCAAGGGCATCAAAGCGATGGGACTCGAATTGTTTACGGAAGGCCGGAAAAAGCTG CCGACCGTCACTTGTGTGAAAGTTCCTGATCGGGTTGACGCAGATCTTGTCAGGAAGATGATGCTTGACGACTTCGGCGT CGAAATCGCCAGCTCTTTCGGGCCGCTGGCCGGAAAGATATGGAGAATCGGAACGATGGGATACAGCTGCCGGAAAGAAA ATGTTCTTTTTACATTGGCTGCTCTCGAAGCTGTTCTCATTCGCACAGGTGCTTCAGTATCGCCGGGAAATGCGCTTCAG GCGGCACTGGATTTCTATCATGAGTAG
Upstream 100 bases:
>100_bases GCCGGAAGAATGGACAAAACCGGCTGATCTTGCAGCCGGCGTTGAGCTCTTGACTCATGTATTATACAGGCTGGCATATG AATGAAAGGAGAAAAAGATC
Downstream 100 bases:
>100_bases GCTTCTGAGATAGAGGAAGGCTCGTGTTTGACGGCTCCGGCACGCGCGGGGCAACAGGTGGAACATGGCTGAACGAAAGA GATACAAAAAGCGGTTCACT
Product: YurG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MTIGEMNIPKRTIMTPGPVEVHPRVLRALSSPVLGQFDPAFTDMMNDVMALLRQIFRTTNKWAFPIDGTSRAGLEAVLAS LIKPGDRVLIPIFGRFGYLLAEICERYQADVYTMECPWGDVFEPKEVISEIKRTKPEIVAVVHGETSTGCIQPLEEIGRA CRELDVLCVVDAVATIGGTDVNTDEWCLDAVVGGTQKCLSVPSGMAPITFNSRVEKRINERKKVERGIATREDIVLETGR LPISSNYFDLGMLMDYWSPRRLNHHTEATSMLYGLREGARVVLEEGLRERFSRHRLHETALIKGIKAMGLELFTEGRKKL PTVTCVKVPDRVDADLVRKMMLDDFGVEIASSFGPLAGKIWRIGTMGYSCRKENVLFTLAALEAVLIRTGASVSPGNALQ AALDFYHE
Sequences:
>Translated_408_residues MTIGEMNIPKRTIMTPGPVEVHPRVLRALSSPVLGQFDPAFTDMMNDVMALLRQIFRTTNKWAFPIDGTSRAGLEAVLAS LIKPGDRVLIPIFGRFGYLLAEICERYQADVYTMECPWGDVFEPKEVISEIKRTKPEIVAVVHGETSTGCIQPLEEIGRA CRELDVLCVVDAVATIGGTDVNTDEWCLDAVVGGTQKCLSVPSGMAPITFNSRVEKRINERKKVERGIATREDIVLETGR LPISSNYFDLGMLMDYWSPRRLNHHTEATSMLYGLREGARVVLEEGLRERFSRHRLHETALIKGIKAMGLELFTEGRKKL PTVTCVKVPDRVDADLVRKMMLDDFGVEIASSFGPLAGKIWRIGTMGYSCRKENVLFTLAALEAVLIRTGASVSPGNALQ AALDFYHE >Mature_407_residues TIGEMNIPKRTIMTPGPVEVHPRVLRALSSPVLGQFDPAFTDMMNDVMALLRQIFRTTNKWAFPIDGTSRAGLEAVLASL IKPGDRVLIPIFGRFGYLLAEICERYQADVYTMECPWGDVFEPKEVISEIKRTKPEIVAVVHGETSTGCIQPLEEIGRAC RELDVLCVVDAVATIGGTDVNTDEWCLDAVVGGTQKCLSVPSGMAPITFNSRVEKRINERKKVERGIATREDIVLETGRL PISSNYFDLGMLMDYWSPRRLNHHTEATSMLYGLREGARVVLEEGLRERFSRHRLHETALIKGIKAMGLELFTEGRKKLP TVTCVKVPDRVDADLVRKMMLDDFGVEIASSFGPLAGKIWRIGTMGYSCRKENVLFTLAALEAVLIRTGASVSPGNALQA ALDFYHE
Specific function: Could encode ureidoglycolase or L-alanine:glyoxylate aminotransferase, or perhaps both activities [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=385, Percent_Identity=31.4285714285714, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17536281, Length=384, Percent_Identity=35.9375, Blast_Score=236, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6321079, Length=389, Percent_Identity=24.6786632390745, Blast_Score=91, Evalue=2e-19, Organism=Drosophila melanogaster, GI17530823, Length=386, Percent_Identity=34.1968911917098, Blast_Score=234, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.-
Molecular weight: Translated: 45346; Mature: 45215
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIGEMNIPKRTIMTPGPVEVHPRVLRALSSPVLGQFDPAFTDMMNDVMALLRQIFRTTN CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC KWAFPIDGTSRAGLEAVLASLIKPGDRVLIPIFGRFGYLLAEICERYQADVYTMECPWGD CEEECCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCC VFEPKEVISEIKRTKPEIVAVVHGETSTGCIQPLEEIGRACRELDVLCVVDAVATIGGTD CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VNTDEWCLDAVVGGTQKCLSVPSGMAPITFNSRVEKRINERKKVERGIATREDIVLETGR CCCHHHHHHHHHCCHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCHHHHEEECCC LPISSNYFDLGMLMDYWSPRRLNHHTEATSMLYGLREGARVVLEEGLRERFSRHRLHETA CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIKGIKAMGLELFTEGRKKLPTVTCVKVPDRVDADLVRKMMLDDFGVEIASSFGPLAGKI HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH WRIGTMGYSCRKENVLFTLAALEAVLIRTGASVSPGNALQAALDFYHE EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TIGEMNIPKRTIMTPGPVEVHPRVLRALSSPVLGQFDPAFTDMMNDVMALLRQIFRTTN CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC KWAFPIDGTSRAGLEAVLASLIKPGDRVLIPIFGRFGYLLAEICERYQADVYTMECPWGD CEEECCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCC VFEPKEVISEIKRTKPEIVAVVHGETSTGCIQPLEEIGRACRELDVLCVVDAVATIGGTD CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VNTDEWCLDAVVGGTQKCLSVPSGMAPITFNSRVEKRINERKKVERGIATREDIVLETGR CCCHHHHHHHHHCCHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCHHHHEEECCC LPISSNYFDLGMLMDYWSPRRLNHHTEATSMLYGLREGARVVLEEGLRERFSRHRLHETA CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIKGIKAMGLELFTEGRKKLPTVTCVKVPDRVDADLVRKMMLDDFGVEIASSFGPLAGKI HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH WRIGTMGYSCRKENVLFTLAALEAVLIRTGASVSPGNALQAALDFYHE EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]