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The map label for this gene is ymcC [H]

Identifier: 52787123

GI number: 52787123

Start: 3275219

End: 3275752

Strand: Reverse

Name: ymcC [H]

Synonym: BLi03431

Alternate gene names: 52787123

Gene position: 3275752-3275219 (Counterclockwise)

Preceding gene: 52787125

Following gene: 52787122

Centisome position: 77.58

GC content: 50.19

Gene sequence:

>534_bases
GTGATTGGTTTATTGATTTTAGCTTGTGAAATCGGCTTTTGGATTTTTATTCTGCTTGGACTTATTTTTCGCTATATGGC
AGGCTGGAAAAAGGCTGGTTTGATCATGTTTGCATGCACACCGGTTTTGGATTTACTGCTTTTGGCTGCAACGTCGCTTG
ATCTGCACAATGGGGCGCAAGCGGATGTTTTGCACGGCATCGCCGCCGTTTATATCGGCGTCAGCATCGCGTTCGGGAGC
CGCATGATCAAATGGGCGGATGAAAGGTTTGCCTATCGCTTTGCCGGAGGTCCGAAGCCTGACAAAGGCCCGCAGTACGG
CAGGGAACACGCCAAAAAAGAGCGTGAAGGCTGGTTTCGCCATTTCATCGCATGGCTGATCGGAGCGGCTCTGCTGGCCG
GGATGCACCTGTTCATCGGCGACCCGGAAAGAACGGAACCATTAATCCGCATCGCTTCTTTATGGTCGATCATCCTTGTC
ATCGATTTTTTGTACAGTTTCAGCTTTACCCTTTTTCCGAGGAAAGCCCGTTAA

Upstream 100 bases:

>100_bases
TTTTTGGCATACACACATTATAACACGGGTGTATTATTTAATACATCTGTGTTATAATTTTTTAGTACGAATGTGTTAAA
AAAAGAGAGGCGGATAAAAG

Downstream 100 bases:

>100_bases
AAGAAGCCGGATGTCCGGCTTCTTTTTCATGTTCAAGTATCCCGCCGCTGAAAAAGGAAATGCTACAAGCAGACCTGGAT
CAAGATTTTCGAAAAAAACC

Product: YmcC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MIGLLILACEIGFWIFILLGLIFRYMAGWKKAGLIMFACTPVLDLLLLAATSLDLHNGAQADVLHGIAAVYIGVSIAFGS
RMIKWADERFAYRFAGGPKPDKGPQYGREHAKKEREGWFRHFIAWLIGAALLAGMHLFIGDPERTEPLIRIASLWSIILV
IDFLYSFSFTLFPRKAR

Sequences:

>Translated_177_residues
MIGLLILACEIGFWIFILLGLIFRYMAGWKKAGLIMFACTPVLDLLLLAATSLDLHNGAQADVLHGIAAVYIGVSIAFGS
RMIKWADERFAYRFAGGPKPDKGPQYGREHAKKEREGWFRHFIAWLIGAALLAGMHLFIGDPERTEPLIRIASLWSIILV
IDFLYSFSFTLFPRKAR
>Mature_177_residues
MIGLLILACEIGFWIFILLGLIFRYMAGWKKAGLIMFACTPVLDLLLLAATSLDLHNGAQADVLHGIAAVYIGVSIAFGS
RMIKWADERFAYRFAGGPKPDKGPQYGREHAKKEREGWFRHFIAWLIGAALLAGMHLFIGDPERTEPLIRIASLWSIILV
IDFLYSFSFTLFPRKAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19901; Mature: 19901

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGLLILACEIGFWIFILLGLIFRYMAGWKKAGLIMFACTPVLDLLLLAATSLDLHNGAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
ADVLHGIAAVYIGVSIAFGSRMIKWADERFAYRFAGGPKPDKGPQYGREHAKKEREGWFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
HFIAWLIGAALLAGMHLFIGDPERTEPLIRIASLWSIILVIDFLYSFSFTLFPRKAR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIGLLILACEIGFWIFILLGLIFRYMAGWKKAGLIMFACTPVLDLLLLAATSLDLHNGAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
ADVLHGIAAVYIGVSIAFGSRMIKWADERFAYRFAGGPKPDKGPQYGREHAKKEREGWFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
HFIAWLIGAALLAGMHLFIGDPERTEPLIRIASLWSIILVIDFLYSFSFTLFPRKAR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]