Click here to switch to the map view.

The map label for this gene is yugO [H]

Identifier: 52787007

GI number: 52787007

Start: 3172623

End: 3173606

Strand: Direct

Name: yugO [H]

Synonym: BLi03309

Alternate gene names: 52787007

Gene position: 3172623-3173606 (Clockwise)

Preceding gene: 52787006

Following gene: 52787010

Centisome position: 75.13

GC content: 48.98

Gene sequence:

>984_bases
ATGAAATCAAACCGTGTATTCATCGCATGGCTGAGGTGGCCTATATATGTCCGCATCGCAATCATTATCCTTTTATTGAT
CCTCCTTTTCGGTCAGCTGATCACCTTCGTCGAGCCGCAGCAGTTTTCAAATGTTTTTGAAGGCATATGGTGGGCCCTGA
TCACCGTGTCCTCAGTCGGATACGGCGATTTTGTCCCTAAAACAGCGCTCGGCAAAATCGTCGGCATGCTCCTGATTTTA
ATAGGGGCAGCGTTTGTCACGGCCTATTTTGCAACGATGGCGACGGCCGCTTTCAGCAAGCAGCAGCGCTACGCCGAAGG
CAAGGTGAACTACAGAGGCAAGGGGCATATGATCCTGATCGGCTGGAACGAGAAATCCAACAAGCTGATGAGGACGCTCC
AGGCCGCCGATTCAAACAAAACGATCGTCCTCATTGATGAAACGCTAAAGGAAGGTCCCCTGATGGAAAACATTCATTTC
ATCAGAGGACACGCAGCGGATGATGCCACACTGCAAAAAGCGAATATCGAAGAGGCTGAAATCGTCTTTATAACCGCCGA
TCAGCATAAAAGCGAAATATCTGCAGACATGCAGTCGGTCTTAACATTGCTGGCCGTTAAAGGCTTGAACCCGTCGGTGT
ATTGCGTTGTAGAAATCTTGACGGAAAAGCAGAAAAAAAATGCCGAGCGCGCCGGAGCCAACCAAATCATCAGTACGGCG
GACCTTTTAAAAACGGCGATGCTGCAGCATTTTCTCATTAAAGACCAGCTTCCTGATCCGCTTTTTACGGAAGCGGATAT
TCATTTCAAAGTCCATCGGGTTCCGCTTCCGAAGACGATGGAGGGCGCGTCTTTTCAAGAAGTGATCCGCCATTTTATGA
AGGAAGACATTTTCATCATCGGTGTCCACCAAAAAGACGGGCCTGTGCTGTCTCCTTCTTTTTCGTACAAGCTACAGCCG
ACGGACCAGCTGCTGTCCCTTTAA

Upstream 100 bases:

>100_bases
AAGCGATTGAACAGCACGGGAAAGTTAGCACCAATCAAAAGTTAAATGCGATCATCAAAGAAATTTTATCATTTTCCCTG
CGGAAAGACGGTGAAGAAGC

Downstream 100 bases:

>100_bases
GAAAGAAGCGCCTCTTCGAGTTCTTTTACATACGATTGGCCAAGCTTTTCATAGACGCCGGGAATATCGGCGTCTTTTTC
TTTCGGTTCGGCAAACTGGT

Product: YugO

Products: K (I) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKSNRVFIAWLRWPIYVRIAIIILLLILLFGQLITFVEPQQFSNVFEGIWWALITVSSVGYGDFVPKTALGKIVGMLLIL
IGAAFVTAYFATMATAAFSKQQRYAEGKVNYRGKGHMILIGWNEKSNKLMRTLQAADSNKTIVLIDETLKEGPLMENIHF
IRGHAADDATLQKANIEEAEIVFITADQHKSEISADMQSVLTLLAVKGLNPSVYCVVEILTEKQKKNAERAGANQIISTA
DLLKTAMLQHFLIKDQLPDPLFTEADIHFKVHRVPLPKTMEGASFQEVIRHFMKEDIFIIGVHQKDGPVLSPSFSYKLQP
TDQLLSL

Sequences:

>Translated_327_residues
MKSNRVFIAWLRWPIYVRIAIIILLLILLFGQLITFVEPQQFSNVFEGIWWALITVSSVGYGDFVPKTALGKIVGMLLIL
IGAAFVTAYFATMATAAFSKQQRYAEGKVNYRGKGHMILIGWNEKSNKLMRTLQAADSNKTIVLIDETLKEGPLMENIHF
IRGHAADDATLQKANIEEAEIVFITADQHKSEISADMQSVLTLLAVKGLNPSVYCVVEILTEKQKKNAERAGANQIISTA
DLLKTAMLQHFLIKDQLPDPLFTEADIHFKVHRVPLPKTMEGASFQEVIRHFMKEDIFIIGVHQKDGPVLSPSFSYKLQP
TDQLLSL
>Mature_327_residues
MKSNRVFIAWLRWPIYVRIAIIILLLILLFGQLITFVEPQQFSNVFEGIWWALITVSSVGYGDFVPKTALGKIVGMLLIL
IGAAFVTAYFATMATAAFSKQQRYAEGKVNYRGKGHMILIGWNEKSNKLMRTLQAADSNKTIVLIDETLKEGPLMENIHF
IRGHAADDATLQKANIEEAEIVFITADQHKSEISADMQSVLTLLAVKGLNPSVYCVVEILTEKQKKNAERAGANQIISTA
DLLKTAMLQHFLIKDQLPDPLFTEADIHFKVHRVPLPKTMEGASFQEVIRHFMKEDIFIIGVHQKDGPVLSPSFSYKLQP
TDQLLSL

Specific function: May Play A Role In The Defense Against Osmotic Shock. [C]

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI32564080, Length=100, Percent_Identity=33, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32564082, Length=100, Percent_Identity=33, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI32564090, Length=100, Percent_Identity=33, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI32564088, Length=100, Percent_Identity=33, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI32564084, Length=100, Percent_Identity=33, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI32564086, Length=101, Percent_Identity=32.6732673267327, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI32564076, Length=100, Percent_Identity=33, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71986574, Length=63, Percent_Identity=38.0952380952381, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013099
- InterPro:   IPR003091
- InterPro:   IPR016040
- InterPro:   IPR003148 [H]

Pfam domain/function: PF07885 Ion_trans_2; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 36698; Mature: 36698

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNRVFIAWLRWPIYVRIAIIILLLILLFGQLITFVEPQQFSNVFEGIWWALITVSSVG
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
YGDFVPKTALGKIVGMLLILIGAAFVTAYFATMATAAFSKQQRYAEGKVNYRGKGHMILI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEE
GWNEKSNKLMRTLQAADSNKTIVLIDETLKEGPLMENIHFIRGHAADDATLQKANIEEAE
EECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHCCHHEECCCCCCCHHHHCCCCCEE
IVFITADQHKSEISADMQSVLTLLAVKGLNPSVYCVVEILTEKQKKNAERAGANQIISTA
EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
DLLKTAMLQHFLIKDQLPDPLFTEADIHFKVHRVPLPKTMEGASFQEVIRHFMKEDIFII
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEE
GVHQKDGPVLSPSFSYKLQPTDQLLSL
EEECCCCCEECCCCCEEECCHHHHHCC
>Mature Secondary Structure
MKSNRVFIAWLRWPIYVRIAIIILLLILLFGQLITFVEPQQFSNVFEGIWWALITVSSVG
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
YGDFVPKTALGKIVGMLLILIGAAFVTAYFATMATAAFSKQQRYAEGKVNYRGKGHMILI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEE
GWNEKSNKLMRTLQAADSNKTIVLIDETLKEGPLMENIHFIRGHAADDATLQKANIEEAE
EECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHCCHHEECCCCCCCHHHHCCCCCEE
IVFITADQHKSEISADMQSVLTLLAVKGLNPSVYCVVEILTEKQKKNAERAGANQIISTA
EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
DLLKTAMLQHFLIKDQLPDPLFTEADIHFKVHRVPLPKTMEGASFQEVIRHFMKEDIFII
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEE
GVHQKDGPVLSPSFSYKLQPTDQLLSL
EEECCCCCEECCCCCEEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]