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The map label for this gene is rpmE2

Identifier: 52786938

GI number: 52786938

Start: 3094601

End: 3094846

Strand: Reverse

Name: rpmE2

Synonym: BLi03214

Alternate gene names: 52786938

Gene position: 3094846-3094601 (Counterclockwise)

Preceding gene: 52786942

Following gene: 52786935

Centisome position: 73.29

GC content: 41.46

Gene sequence:

>246_bases
ATGAAACCAAATATTCATCCGAAAACTTATCAAGTGATCTTTCAGGATGTAAACAGCGGGTACCGTTTTTTAAGCCGCTC
AACTAAAACTTCCGATGAGACGGCCGAGTGGGAAGACGGCAAGACGTATCCCGTTATAAAAGTTGAGGTGAGCTCTGATA
CCCATCCGTTTTATACCGGAAGACAGAAATTCAATGAAAGAGGCGGAAGGGTCGAACAGTTCAAGAAAAGATTTAATATG
GATTAA

Upstream 100 bases:

>100_bases
AAGGGATTAAGTATGGCAAATGAACATTCATTTTTGACACAGGGATTTGAAAGGTATATAATAAAACGTAATTATTACGT
TTTGACGGGAGGAATGGCAT

Downstream 100 bases:

>100_bases
TAAATTAAAAAGACCGGATGTTTCCGGCCTTTTTTTTCGTCCATTTAAAAAACAAGCGCATGACATCTCATGCGCTTGTT
CTCTGTTATTTGCTTGATAA

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MKPNIHPKTYQVIFQDVNSGYRFLSRSTKTSDETAEWEDGKTYPVIKVEVSSDTHPFYTGRQKFNERGGRVEQFKKRFNM
D

Sequences:

>Translated_81_residues
MKPNIHPKTYQVIFQDVNSGYRFLSRSTKTSDETAEWEDGKTYPVIKVEVSSDTHPFYTGRQKFNERGGRVEQFKKRFNM
D
>Mature_81_residues
MKPNIHPKTYQVIFQDVNSGYRFLSRSTKTSDETAEWEDGKTYPVIKVEVSSDTHPFYTGRQKFNERGGRVEQFKKRFNM
D

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=79, Percent_Identity=43.0379746835443, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_BACLD (Q65FU0)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_080350.1
- RefSeq:   YP_092767.1
- ProteinModelPortal:   Q65FU0
- SMR:   Q65FU0
- STRING:   Q65FU0
- EnsemblBacteria:   EBBACT00000056337
- EnsemblBacteria:   EBBACT00000060848
- GeneID:   3027452
- GeneID:   3099102
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi03214
- KEGG:   bli:BL02403
- NMPDR:   fig|279010.5.peg.802
- eggNOG:   COG0254
- GeneTree:   EBGT00050000002228
- HOGENOM:   HBG610087
- OMA:   FQDIGAD
- ProtClustDB:   PRK01678
- BioCyc:   BLIC279010-1:BLI03214-MONOMER
- BioCyc:   BLIC279010:BL02403-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9581; Mature: 9581

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPNIHPKTYQVIFQDVNSGYRFLSRSTKTSDETAEWEDGKTYPVIKVEVSSDTHPFYTG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
RQKFNERGGRVEQFKKRFNMD
HHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKPNIHPKTYQVIFQDVNSGYRFLSRSTKTSDETAEWEDGKTYPVIKVEVSSDTHPFYTG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
RQKFNERGGRVEQFKKRFNMD
HHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA