BacMap

Definition	Bacillus licheniformis ATCC 14580, complete genome.
Accession	NC_006322
Length	4,222,645

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The map label for this gene is ytrB [H]

Identifier: 52786908

GI number: 52786908

Start: 3067572

End: 3068450

Strand: Reverse

Name: ytrB [H]

Synonym: BLi03184

Alternate gene names: 52786908

Gene position: 3068450-3067572 (Counterclockwise)

Preceding gene: 52786909

Following gene: 52786907

Centisome position: 72.67

GC content: 42.43

Gene sequence:

>879_bases
ATGATTGAGCTCAAATCTGTTTCAAAAACGATTGACGGAAAACAAATACTTAAAGACATCTCCTTTAAGCTGGAGGAAGG
AGAGATTTTCGGACTTCTCGGAAGAAACGGCTCAGGAAAAACGACGCTTCTTCGCCTGATTCAGCAAATCCTGCTGCCTG
ATGAGGGAGATATCTTTTTCGGCAGCGTCAAGGTGAAGGATCATCCGCTCGTCAAGCGCAACATCGTCTATATGCCCGTT
CAAAACACCTATTTCGAAAAATACAATTACAAACAGCTCGTCAATATTTTGCGTAACATTTATCCGGACTTTGATGTTAC
ATATGCAAATGAATTAATGAACCGATACGATATTCCCGAAACAAAAAAGTACAGGGAATTGTCTACAGGATTGAAAAAGC
AAATGTCGCTGATCCTGTCATTTGCGATCCGGCCGGCGGTCATCCTGCTTGATGAGCCGACAGACGGCATTGATGCCGTC
ACAAGACAAGACGTTCTTCAGCTGATGGTCGATGAAGTGGCTGAAAACAACACGACGATTCTCATCACATCTCACCGGCT
TGAGGACATTGAAAGAATGTGCAACCGAATCGGTTTTCTCGAAGACAATACATTGTCGAACATCATGGATCTTGATGAAC
TGAAAGGCGATTTTATTAAAATTCAAATGGCATTTGAAGAAGATGTCAATTTAAAAATCAGGGAAAGGGAAATCCCTGTT
TTGGACCACACCGGCGTCTTTTATACGGTATTGGTTCCGAAAGAAGACAATGTGAGCAAACAATTTCTTAAAAGTTTGTC
TCCGAAAGTTTGGAACGAGCTTCCGGTCAGTCTTGAGGAAGTATTCATCGCGAAGTATGGAGGTAAGCGAAGATGGTAG

Upstream 100 bases:

>100_bases
AAGCAGCTGATCATCGATGCGCATTACGCGGGGATCGACACCAAAAAGCTGCAGGAGTGGATGGCGGAAATCGACGAAGA
AGTGAGAGGAGGCGAAGTGA

Downstream 100 bases:

>100_bases
ACCGCGGACTTTTATATAAAGAATGGAAACAGCATTTCTGGATTTTTTTAGTTGTTTTTGCAGCGGTGTTGCTGAGTGAA
CCGCTTGCGATTTTGAATGA

Product: YtrB

Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIELKSVSKTIDGKQILKDISFKLEEGEIFGLLGRNGSGKTTLLRLIQQILLPDEGDIFFGSVKVKDHPLVKRNIVYMPV
QNTYFEKYNYKQLVNILRNIYPDFDVTYANELMNRYDIPETKKYRELSTGLKKQMSLILSFAIRPAVILLDEPTDGIDAV
TRQDVLQLMVDEVAENNTTILITSHRLEDIERMCNRIGFLEDNTLSNIMDLDELKGDFIKIQMAFEEDVNLKIREREIPV
LDHTGVFYTVLVPKEDNVSKQFLKSLSPKVWNELPVSLEEVFIAKYGGKRRW

Sequences:

>Translated_292_residues
MIELKSVSKTIDGKQILKDISFKLEEGEIFGLLGRNGSGKTTLLRLIQQILLPDEGDIFFGSVKVKDHPLVKRNIVYMPV
QNTYFEKYNYKQLVNILRNIYPDFDVTYANELMNRYDIPETKKYRELSTGLKKQMSLILSFAIRPAVILLDEPTDGIDAV
TRQDVLQLMVDEVAENNTTILITSHRLEDIERMCNRIGFLEDNTLSNIMDLDELKGDFIKIQMAFEEDVNLKIREREIPV
LDHTGVFYTVLVPKEDNVSKQFLKSLSPKVWNELPVSLEEVFIAKYGGKRRW
>Mature_292_residues
MIELKSVSKTIDGKQILKDISFKLEEGEIFGLLGRNGSGKTTLLRLIQQILLPDEGDIFFGSVKVKDHPLVKRNIVYMPV
QNTYFEKYNYKQLVNILRNIYPDFDVTYANELMNRYDIPETKKYRELSTGLKKQMSLILSFAIRPAVILLDEPTDGIDAV
TRQDVLQLMVDEVAENNTTILITSHRLEDIERMCNRIGFLEDNTLSNIMDLDELKGDFIKIQMAFEEDVNLKIREREIPV
LDHTGVFYTVLVPKEDNVSKQFLKSLSPKVWNELPVSLEEVFIAKYGGKRRW

Specific function: Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI153792144, Length=222, Percent_Identity=27.027027027027, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI27436953, Length=238, Percent_Identity=27.7310924369748, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI27881501, Length=252, Percent_Identity=26.984126984127, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI30795238, Length=252, Percent_Identity=26.984126984127, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI27262624, Length=295, Percent_Identity=25.4237288135593, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI27262626, Length=295, Percent_Identity=25.4237288135593, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI31657092, Length=279, Percent_Identity=26.1648745519713, Blast_Score=88, Evalue=9e-18,
Organism=Homo sapiens, GI116734710, Length=209, Percent_Identity=31.1004784688995, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI6005701, Length=212, Percent_Identity=26.4150943396226, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI27477115, Length=208, Percent_Identity=25.4807692307692, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI45446740, Length=229, Percent_Identity=24.8908296943231, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI47078218, Length=229, Percent_Identity=24.8908296943231, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI150417984, Length=223, Percent_Identity=25.5605381165919, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI21536376, Length=205, Percent_Identity=22.9268292682927, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI42490749, Length=193, Percent_Identity=27.979274611399, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI255708477, Length=219, Percent_Identity=26.4840182648402, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI90421313, Length=216, Percent_Identity=25.462962962963, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787029, Length=217, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87081791, Length=278, Percent_Identity=28.0575539568345, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI48994943, Length=188, Percent_Identity=29.7872340425532, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87081782, Length=222, Percent_Identity=26.5765765765766, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1789593, Length=202, Percent_Identity=29.7029702970297, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786319, Length=212, Percent_Identity=28.3018867924528, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1788225, Length=220, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790739, Length=199, Percent_Identity=28.643216080402, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1789032, Length=214, Percent_Identity=26.1682242990654, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1786698, Length=197, Percent_Identity=28.4263959390863, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1789891, Length=211, Percent_Identity=25.5924170616114, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1786345, Length=211, Percent_Identity=26.0663507109005, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790525, Length=274, Percent_Identity=24.4525547445255, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788165, Length=201, Percent_Identity=29.8507462686567, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789873, Length=219, Percent_Identity=27.3972602739726, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788761, Length=211, Percent_Identity=26.5402843601896, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787143, Length=221, Percent_Identity=26.2443438914027, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786253, Length=193, Percent_Identity=26.9430051813472, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786563, Length=216, Percent_Identity=27.3148148148148, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1788450, Length=205, Percent_Identity=24.8780487804878, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787089, Length=223, Percent_Identity=25.5605381165919, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788506, Length=208, Percent_Identity=26.4423076923077, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788897, Length=226, Percent_Identity=24.3362831858407, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI1787792, Length=196, Percent_Identity=28.0612244897959, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790467, Length=172, Percent_Identity=26.7441860465116, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87081834, Length=204, Percent_Identity=24.5098039215686, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787370, Length=216, Percent_Identity=23.6111111111111, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788472, Length=253, Percent_Identity=23.3201581027668, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789962, Length=212, Percent_Identity=25, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87081709, Length=194, Percent_Identity=25.7731958762887, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786872, Length=217, Percent_Identity=27.1889400921659, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787712, Length=219, Percent_Identity=23.7442922374429, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87082267, Length=206, Percent_Identity=25.2427184466019, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=207, Percent_Identity=27.0531400966184, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI115533608, Length=224, Percent_Identity=25.8928571428571, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71983523, Length=202, Percent_Identity=26.7326732673267, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71983516, Length=202, Percent_Identity=26.7326732673267, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71983510, Length=202, Percent_Identity=26.7326732673267, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17533971, Length=222, Percent_Identity=27.4774774774775, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17565586, Length=220, Percent_Identity=24.5454545454545, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17565938, Length=211, Percent_Identity=26.0663507109005, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=194, Percent_Identity=22.680412371134, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=187, Percent_Identity=25.668449197861, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17555318, Length=215, Percent_Identity=23.7209302325581, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17511077, Length=190, Percent_Identity=25.2631578947368, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322177, Length=192, Percent_Identity=27.0833333333333, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324585, Length=192, Percent_Identity=25, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24666092, Length=220, Percent_Identity=28.1818181818182, Blast_Score=101, Evalue=6e-22,
Organism=Drosophila melanogaster, GI116007328, Length=270, Percent_Identity=27.037037037037, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI28574150, Length=280, Percent_Identity=26.4285714285714, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI221512771, Length=222, Percent_Identity=26.5765765765766, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24648314, Length=221, Percent_Identity=27.6018099547511, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI116007184, Length=193, Percent_Identity=28.4974093264249, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI221500365, Length=193, Percent_Identity=28.4974093264249, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24650853, Length=209, Percent_Identity=27.7511961722488, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24650855, Length=210, Percent_Identity=27.6190476190476, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281362751, Length=210, Percent_Identity=27.6190476190476, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28573571, Length=245, Percent_Identity=25.7142857142857, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28573573, Length=245, Percent_Identity=25.7142857142857, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24643674, Length=223, Percent_Identity=25.1121076233184, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI85725262, Length=233, Percent_Identity=27.4678111587983, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24582014, Length=212, Percent_Identity=24.0566037735849, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24582012, Length=212, Percent_Identity=24.0566037735849, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 33783; Mature: 33783

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELKSVSKTIDGKQILKDISFKLEEGEIFGLLGRNGSGKTTLLRLIQQILLPDEGDIFF
CCCCCHHHHHCCHHHHHHHHHCEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE
GSVKVKDHPLVKRNIVYMPVQNTYFEKYNYKQLVNILRNIYPDFDVTYANELMNRYDIPE
EEEEECCCCCEECCEEEEECCHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
TKKYRELSTGLKKQMSLILSFAIRPAVILLDEPTDGIDAVTRQDVLQLMVDEVAENNTTI
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEE
LITSHRLEDIERMCNRIGFLEDNTLSNIMDLDELKGDFIKIQMAFEEDVNLKIREREIPV
EEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCE
LDHTGVFYTVLVPKEDNVSKQFLKSLSPKVWNELPVSLEEVFIAKYGGKRRW
EECCCEEEEEEECCCCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIELKSVSKTIDGKQILKDISFKLEEGEIFGLLGRNGSGKTTLLRLIQQILLPDEGDIFF
CCCCCHHHHHCCHHHHHHHHHCEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE
GSVKVKDHPLVKRNIVYMPVQNTYFEKYNYKQLVNILRNIYPDFDVTYANELMNRYDIPE
EEEEECCCCCEECCEEEEECCHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
TKKYRELSTGLKKQMSLILSFAIRPAVILLDEPTDGIDAVTRQDVLQLMVDEVAENNTTI
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEE
LITSHRLEDIERMCNRIGFLEDNTLSNIMDLDELKGDFIKIQMAFEEDVNLKIREREIPV
EEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCE
LDHTGVFYTVLVPKEDNVSKQFLKSLSPKVWNELPVSLEEVFIAKYGGKRRW
EECCCEEEEEEECCCCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamine [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]