Click here to switch to the map view.

The map label for this gene is ytrC [H]

Identifier: 52786907

GI number: 52786907

Start: 3066601

End: 3067578

Strand: Reverse

Name: ytrC [H]

Synonym: BLi03183

Alternate gene names: 52786907

Gene position: 3067578-3066601 (Counterclockwise)

Preceding gene: 52786908

Following gene: 52786906

Centisome position: 72.65

GC content: 44.07

Gene sequence:

>978_bases
ATGGTAGACCGCGGACTTTTATATAAAGAATGGAAACAGCATTTCTGGATTTTTTTAGTTGTTTTTGCAGCGGTGTTGCT
GAGTGAACCGCTTGCGATTTTGAATGATTATTTCCAGTACCAGGGATGCCTTGCAGAACAGAAAAAATTTCCCGATATAG
AGTGCGTTTTATATAAAGATTATGGGGTAAGCGGGGCCATGAGAATGTTCTGGGTTGGCGGAGTCGCGCTTGCGATCAGC
CAGATCGGGTTTGAACGGAGCAGAGGAACGCTTGACTTTACACTCGGCCTCCCTTACAAGCGCGGCGTCATTTTCAATAC
TAAATATTTCTTCGGCATTTCAATTCTTTTAACAGCCCAGCTATTATCTTACTTGTTATCTTACGCTTTGATTATTTTGT
ATAACGTTGACGTTGTCTTTTTCCATGAGTATTTTATCGGGGCGGTTATCTTCTGCTTTATGGTCTACTCGCTTGTCATG
GCGGCGGGCGCGATGACCGGCAATCCGCTGGCCCAGATGATCGTTGCTTTTTCAGCGTCGATTCTGCCGTATTTGCTGAT
CGGCCTTCCGCTGGCCAACTTACGAATCATCCTGGGTTTCTTTGGGCATGACCCTGCTTTCTTTTATGGTGAAACAGAAC
TACTAGATTATATAACGCCGATCATATACCTCAACAGTTTCGGCATTCAAGACGGCAGCCTGGCCTTTACGCTTATTCCG
CTCGCCATGGGGATCTTGTTTTATATAATCGGCTATTTCTGCTTTATCAAACAGCAGCTTGAACGGAACGGACATTTTTT
CCTTTGGAGAAAAATGGATCGTCCGATCCAGATTCTCGTGATTTTATTCGGCATCTGGGGATTCGGCACAGCCGCTGCTT
CGAGTCTGTTCAGCTATATATTCGGTATGTTGATCGGTTCGGCAGTCGGATTTTTAATCAGTTACTTCTTGATTTTCAAA
AAAATAAAACAGCTGTAA

Upstream 100 bases:

>100_bases
TGAGCAAACAATTTCTTAAAAGTTTGTCTCCGAAAGTTTGGAACGAGCTTCCGGTCAGTCTTGAGGAAGTATTCATCGCG
AAGTATGGAGGTAAGCGAAG

Downstream 100 bases:

>100_bases
TCATTAATGGAGAGGAGATTTACAAATGATCAGTGTAAAGCATATTCACCACTCGTTTAAAGTCGGCAAAAAGGGAAGGG
AAAATGAAATTAAGGTGTTA

Product: YtrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MVDRGLLYKEWKQHFWIFLVVFAAVLLSEPLAILNDYFQYQGCLAEQKKFPDIECVLYKDYGVSGAMRMFWVGGVALAIS
QIGFERSRGTLDFTLGLPYKRGVIFNTKYFFGISILLTAQLLSYLLSYALIILYNVDVVFFHEYFIGAVIFCFMVYSLVM
AAGAMTGNPLAQMIVAFSASILPYLLIGLPLANLRIILGFFGHDPAFFYGETELLDYITPIIYLNSFGIQDGSLAFTLIP
LAMGILFYIIGYFCFIKQQLERNGHFFLWRKMDRPIQILVILFGIWGFGTAAASSLFSYIFGMLIGSAVGFLISYFLIFK
KIKQL

Sequences:

>Translated_325_residues
MVDRGLLYKEWKQHFWIFLVVFAAVLLSEPLAILNDYFQYQGCLAEQKKFPDIECVLYKDYGVSGAMRMFWVGGVALAIS
QIGFERSRGTLDFTLGLPYKRGVIFNTKYFFGISILLTAQLLSYLLSYALIILYNVDVVFFHEYFIGAVIFCFMVYSLVM
AAGAMTGNPLAQMIVAFSASILPYLLIGLPLANLRIILGFFGHDPAFFYGETELLDYITPIIYLNSFGIQDGSLAFTLIP
LAMGILFYIIGYFCFIKQQLERNGHFFLWRKMDRPIQILVILFGIWGFGTAAASSLFSYIFGMLIGSAVGFLISYFLIFK
KIKQL
>Mature_325_residues
MVDRGLLYKEWKQHFWIFLVVFAAVLLSEPLAILNDYFQYQGCLAEQKKFPDIECVLYKDYGVSGAMRMFWVGGVALAIS
QIGFERSRGTLDFTLGLPYKRGVIFNTKYFFGISILLTAQLLSYLLSYALIILYNVDVVFFHEYFIGAVIFCFMVYSLVM
AAGAMTGNPLAQMIVAFSASILPYLLIGLPLANLRIILGFFGHDPAFFYGETELLDYITPIIYLNSFGIQDGSLAFTLIP
LAMGILFYIIGYFCFIKQQLERNGHFFLWRKMDRPIQILVILFGIWGFGTAAASSLFSYIFGMLIGSAVGFLISYFLIFK
KIKQL

Specific function: Part of the ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-5 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36902; Mature: 36902

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDRGLLYKEWKQHFWIFLVVFAAVLLSEPLAILNDYFQYQGCLAEQKKFPDIECVLYKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
YGVSGAMRMFWVGGVALAISQIGFERSRGTLDFTLGLPYKRGVIFNTKYFFGISILLTAQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHH
LLSYLLSYALIILYNVDVVFFHEYFIGAVIFCFMVYSLVMAAGAMTGNPLAQMIVAFSAS
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ILPYLLIGLPLANLRIILGFFGHDPAFFYGETELLDYITPIIYLNSFGIQDGSLAFTLIP
HHHHHHHHCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LAMGILFYIIGYFCFIKQQLERNGHFFLWRKMDRPIQILVILFGIWGFGTAAASSLFSYI
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FGMLIGSAVGFLISYFLIFKKIKQL
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVDRGLLYKEWKQHFWIFLVVFAAVLLSEPLAILNDYFQYQGCLAEQKKFPDIECVLYKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
YGVSGAMRMFWVGGVALAISQIGFERSRGTLDFTLGLPYKRGVIFNTKYFFGISILLTAQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHH
LLSYLLSYALIILYNVDVVFFHEYFIGAVIFCFMVYSLVMAAGAMTGNPLAQMIVAFSAS
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ILPYLLIGLPLANLRIILGFFGHDPAFFYGETELLDYITPIIYLNSFGIQDGSLAFTLIP
HHHHHHHHCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LAMGILFYIIGYFCFIKQQLERNGHFFLWRKMDRPIQILVILFGIWGFGTAAASSLFSYI
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FGMLIGSAVGFLISYFLIFKKIKQL
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]