| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is leuS
Identifier: 52786900
GI number: 52786900
Start: 3058041
End: 3060455
Strand: Reverse
Name: leuS
Synonym: BLi03175
Alternate gene names: 52786900
Gene position: 3060455-3058041 (Counterclockwise)
Preceding gene: 52786901
Following gene: 52786899
Centisome position: 72.48
GC content: 49.81
Gene sequence:
>2415_bases TTGAGCTTTGACCATCAAACAATCGAGAAAAAGTGGCAGGACTATTGGCTGAAAAATAAAACGTTTGCCACTCGTGAAGA TAAATCCAAACCTAAATTTTATGCATTGGACATGTTTCCGTATCCGTCGGGCGCAGGCCTTCACGTCGGACACCCTGAAG GCTATACAGCAACTGACATTTTGTCCCGCATGAAACGGATGCAAGGGTACAATGTCCTCCATCCGATGGGCTGGGATGCA TTCGGGCTTCCTGCCGAGCAATATGCGCTAGATACGGGAAACGATCCTGCCGTCTTCACCGAGCAGAACATTGACAACTT CCGCCGCCAGATCAGAGCGCTCGGCTTTTCGTATGATTGGGACAGAGAAGTCAACACAACAGATCCGGACTACTATAAAT GGACGCAGTGGATTTTCTTAAAGCTTTACGAAAAAGGTCTCGCTTATGTAGATGAGGTCCCTGTAAACTGGTGTCCTGCG CTTGGAACCGTTCTTGCCAATGAAGAAGTCATCGACGGCAAAAGCGAACGCGGCGGACATCCTGTAGAACGCCGTCCAAT GAAGCAGTGGATGCTGAAAATTACCGCTTATGCCGACCGCCTGCTTGAAGACCTGGAAGAACTCGACTGGCCGGAAAGCA TTAAAGAAATGCAGCGCAACTGGATCGGCCGTTCTGAAGGGGCGCATGTTCATTTTGCGGTCGACGGCACCAATGAAACG TTTACGGTTTTCACCACGCGGCCTGACACATTATTCGGTGCGACATATGCCGTGCTGGCTCCGGAGCATGATTTGGTTCA AAAAATCACAACGCCTGAACAGAAAGACGCAGTCAACGCCTATATTGAAGAAGTTCAATCAAAGAGCGACTTGGAGCGGA CAGACCTTGCCAAAACAAAGACAGGCGTCTTCACAGGTGCATATGCGGTTAATCCGGCAAACGGAGAAAAAATTCCGGTC TGGATTGCGGACTATGTCTTGGCTACATACGGGACCGGGGCGGTCATGGCCGTTCCTGCCCATGATGAGCGGGACCATGA ATTTGCATCAGCATTCGGGCTGCCGATCAAAGAAGTCGTCAAAGGCGGGGATGTTGAGAAAGAAGCATATACAGGCGACG GCGAACATATCCATTCAGATTTTCTGAACGGTCTTGATAAAGCGGCTGCGATCGAAAAAATGATCCAGTGGCTTGAGGAA AACGGGAAGGGCGAGAAAAAAGTAACATACCGCCTCCGCGACTGGCTGTTCAGCCGTCAGCGCTACTGGGGCGAGCCGAT CCCGATCATCCATTGGGAAGACGGCACATCGACTCCGGTTCCTGAAGAAGAGCTGCCGCTGATCTTGCCGAAAACGTCGG AAATCAAACCGAGCGGAACGGGTGAGTCCCCTCTTGCGAATATTAAAGAATGGGTGGAAGTGACAGATCCTGAAACAGGC AAAAAGGGAAGACGCGAAACGAATACGATGCCGCAATGGGCGGGAAGCTGCTGGTACTTCCTGCGCTACATTGATCCGAA GAACCCGAACGAGCTGGCTTCCCCTGAAAAATTAAAGGAATGGCTTCCTGTCGATATGTATATCGGAGGGGCGGAGCACG CCGTTCTTCACTTATTGTATGCGCGCTTCTGGCATAAATTCCTTTATGACATCGGGGTCGTTCCGACGAAAGAGCCGTTC AAACAGCTTTATAACCAAGGGATGATTCTTGGCGAAAACAATGAAAAAATGAGCAAATCCAAAGGCAATGTCGTCAATCC GGACGAAATTGTGGAGACGCATGGCGCGGACACGCTCCGGCTGTACGAAATGTTCATGGGACCTTTGGATGCATCGATCG CCTGGTCAACGACAGGGCTTGACGGAGCCCGCCGCTTCCTTGACCGCGTATGGCGTTTGTTTATCGATGACAATGGCGGG TTAAACGAGAAGATCGTTGAAGGAGCCGGCGAAACGCTTGAGCGCGTCTACCATGAAACGGTCATGAAAGTAACGGACCA TTTCGAAGGTCTGCGCTTTAATACAGGCATTTCACAGCTGATGGTCTTCATCAATGAAGCATATAAAGCTGATCAGCTTC CGAAAGAATACATGGAAGGCTTCGTGAAATTGCTTTCTCCTGTCGCGCCTCATTTGGCTGAAGAGCTCTGGAACCGCCTC GGTCATGAGGAAACGATCGCGTATGAAGCATGGCCTGTCTATGATGAAGCGAAGCTCGTGGATGATGAAATTGAAATCGT CGTTCAGCTGAACGGAAAGGTGAAAGCGAAGCTGAACGTTCCAGCCGACGCGGACAAAGAACAGCTTGAAGAGCTGGCGA AAAACAATGAAAAAGTAAAAGAACAGCTAGAAGGAAAAACGATCAGAAAAGTGATCGCTGTGCCTGGAAAGCTTGTAAAT ATTGTTGCAAATTAA
Upstream 100 bases:
>100_bases AGTTTTTTTGATTTTAGAATAATCTGAATATAACGCTGCCAGTCCCGTCCATACTTGAAGACAAAGAAGCCGTACACATA TTCAAAGGAGGTTTTTACAA
Downstream 100 bases:
>100_bases TGGCGAAAGCCCCTTCAATCCGAAGGGGCTTTTTCTGTCATTCCGCCGAAAGGATGATAATATTTCAGACGATCGCTTCG TTTCAAATGATCCATGACCG
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS
Number of amino acids: Translated: 804; Mature: 803
Protein sequence:
>804_residues MSFDHQTIEKKWQDYWLKNKTFATREDKSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDA FGLPAEQYALDTGNDPAVFTEQNIDNFRRQIRALGFSYDWDREVNTTDPDYYKWTQWIFLKLYEKGLAYVDEVPVNWCPA LGTVLANEEVIDGKSERGGHPVERRPMKQWMLKITAYADRLLEDLEELDWPESIKEMQRNWIGRSEGAHVHFAVDGTNET FTVFTTRPDTLFGATYAVLAPEHDLVQKITTPEQKDAVNAYIEEVQSKSDLERTDLAKTKTGVFTGAYAVNPANGEKIPV WIADYVLATYGTGAVMAVPAHDERDHEFASAFGLPIKEVVKGGDVEKEAYTGDGEHIHSDFLNGLDKAAAIEKMIQWLEE NGKGEKKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSTPVPEEELPLILPKTSEIKPSGTGESPLANIKEWVEVTDPETG KKGRRETNTMPQWAGSCWYFLRYIDPKNPNELASPEKLKEWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPF KQLYNQGMILGENNEKMSKSKGNVVNPDEIVETHGADTLRLYEMFMGPLDASIAWSTTGLDGARRFLDRVWRLFIDDNGG LNEKIVEGAGETLERVYHETVMKVTDHFEGLRFNTGISQLMVFINEAYKADQLPKEYMEGFVKLLSPVAPHLAEELWNRL GHEETIAYEAWPVYDEAKLVDDEIEIVVQLNGKVKAKLNVPADADKEQLEELAKNNEKVKEQLEGKTIRKVIAVPGKLVN IVAN
Sequences:
>Translated_804_residues MSFDHQTIEKKWQDYWLKNKTFATREDKSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDA FGLPAEQYALDTGNDPAVFTEQNIDNFRRQIRALGFSYDWDREVNTTDPDYYKWTQWIFLKLYEKGLAYVDEVPVNWCPA LGTVLANEEVIDGKSERGGHPVERRPMKQWMLKITAYADRLLEDLEELDWPESIKEMQRNWIGRSEGAHVHFAVDGTNET FTVFTTRPDTLFGATYAVLAPEHDLVQKITTPEQKDAVNAYIEEVQSKSDLERTDLAKTKTGVFTGAYAVNPANGEKIPV WIADYVLATYGTGAVMAVPAHDERDHEFASAFGLPIKEVVKGGDVEKEAYTGDGEHIHSDFLNGLDKAAAIEKMIQWLEE NGKGEKKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSTPVPEEELPLILPKTSEIKPSGTGESPLANIKEWVEVTDPETG KKGRRETNTMPQWAGSCWYFLRYIDPKNPNELASPEKLKEWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPF KQLYNQGMILGENNEKMSKSKGNVVNPDEIVETHGADTLRLYEMFMGPLDASIAWSTTGLDGARRFLDRVWRLFIDDNGG LNEKIVEGAGETLERVYHETVMKVTDHFEGLRFNTGISQLMVFINEAYKADQLPKEYMEGFVKLLSPVAPHLAEELWNRL GHEETIAYEAWPVYDEAKLVDDEIEIVVQLNGKVKAKLNVPADADKEQLEELAKNNEKVKEQLEGKTIRKVIAVPGKLVN IVAN >Mature_803_residues SFDHQTIEKKWQDYWLKNKTFATREDKSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAF GLPAEQYALDTGNDPAVFTEQNIDNFRRQIRALGFSYDWDREVNTTDPDYYKWTQWIFLKLYEKGLAYVDEVPVNWCPAL GTVLANEEVIDGKSERGGHPVERRPMKQWMLKITAYADRLLEDLEELDWPESIKEMQRNWIGRSEGAHVHFAVDGTNETF TVFTTRPDTLFGATYAVLAPEHDLVQKITTPEQKDAVNAYIEEVQSKSDLERTDLAKTKTGVFTGAYAVNPANGEKIPVW IADYVLATYGTGAVMAVPAHDERDHEFASAFGLPIKEVVKGGDVEKEAYTGDGEHIHSDFLNGLDKAAAIEKMIQWLEEN GKGEKKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSTPVPEEELPLILPKTSEIKPSGTGESPLANIKEWVEVTDPETGK KGRRETNTMPQWAGSCWYFLRYIDPKNPNELASPEKLKEWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFK QLYNQGMILGENNEKMSKSKGNVVNPDEIVETHGADTLRLYEMFMGPLDASIAWSTTGLDGARRFLDRVWRLFIDDNGGL NEKIVEGAGETLERVYHETVMKVTDHFEGLRFNTGISQLMVFINEAYKADQLPKEYMEGFVKLLSPVAPHLAEELWNRLG HEETIAYEAWPVYDEAKLVDDEIEIVVQLNGKVKAKLNVPADADKEQLEELAKNNEKVKEQLEGKTIRKVIAVPGKLVNI VAN
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI7661872, Length=870, Percent_Identity=34.4827586206897, Blast_Score=486, Evalue=1e-137, Organism=Homo sapiens, GI94721239, Length=181, Percent_Identity=29.2817679558011, Blast_Score=74, Evalue=6e-13, Organism=Homo sapiens, GI94721241, Length=181, Percent_Identity=29.2817679558011, Blast_Score=74, Evalue=6e-13, Organism=Escherichia coli, GI1786861, Length=858, Percent_Identity=44.988344988345, Blast_Score=699, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=398, Percent_Identity=25.8793969849246, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71997517, Length=802, Percent_Identity=30.5486284289277, Blast_Score=333, Evalue=3e-91, Organism=Caenorhabditis elegans, GI71997510, Length=805, Percent_Identity=30.5590062111801, Blast_Score=332, Evalue=3e-91, Organism=Caenorhabditis elegans, GI212645227, Length=373, Percent_Identity=28.9544235924933, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71980946, Length=816, Percent_Identity=22.7941176470588, Blast_Score=108, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17510661, Length=420, Percent_Identity=23.5714285714286, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17554638, Length=275, Percent_Identity=25.8181818181818, Blast_Score=70, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6323414, Length=810, Percent_Identity=36.9135802469136, Blast_Score=474, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6321531, Length=371, Percent_Identity=25.6064690026954, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI21355409, Length=874, Percent_Identity=32.0366132723112, Blast_Score=389, Evalue=1e-108, Organism=Drosophila melanogaster, GI281366294, Length=155, Percent_Identity=31.6129032258064, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYL_BACLD (Q65FX8)
Other databases:
- EMBL: AE017333 - EMBL: CP000002 - RefSeq: YP_080312.1 - RefSeq: YP_092729.1 - ProteinModelPortal: Q65FX8 - SMR: Q65FX8 - STRING: Q65FX8 - EnsemblBacteria: EBBACT00000055425 - EnsemblBacteria: EBBACT00000059617 - GeneID: 3028705 - GeneID: 3098985 - GenomeReviews: AE017333_GR - GenomeReviews: CP000002_GR - KEGG: bld:BLi03175 - KEGG: bli:BL00016 - NMPDR: fig|279010.5.peg.764 - eggNOG: COG0495 - GeneTree: EBGT00070000031891 - HOGENOM: HBG693845 - OMA: ERGNFPV - ProtClustDB: PRK00390 - BioCyc: BLIC279010-1:BLI03175-MONOMER - BioCyc: BLIC279010:BL00016-MONOMER - GO: GO:0005737 - HAMAP: MF_00049_B - InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11946:SF7 - PRINTS: PR00985 - TIGRFAMs: TIGR00396
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1; SSF47323 tRNAsyn_1a_bind; SSF50677 ValRS_IleRS_edit
EC number: =6.1.1.4
Molecular weight: Translated: 91635; Mature: 91504
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 579-579
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDHQTIEKKWQDYWLKNKTFATREDKSKPKFYALDMFPYPSGAGLHVGHPEGYTATDI CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCHHHH LSRMKRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPAVFTEQNIDNFRRQIRALGFSYDW HHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCC DREVNTTDPDYYKWTQWIFLKLYEKGLAYVDEVPVNWCPALGTVLANEEVIDGKSERGGH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCCCCCCC PVERRPMKQWMLKITAYADRLLEDLEELDWPESIKEMQRNWIGRSEGAHVHFAVDGTNET CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCE FTVFTTRPDTLFGATYAVLAPEHDLVQKITTPEQKDAVNAYIEEVQSKSDLERTDLAKTK EEEEECCCCCHHCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH TGVFTGAYAVNPANGEKIPVWIADYVLATYGTGAVMAVPAHDERDHEFASAFGLPIKEVV CCEEECEEEECCCCCCEEEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCHHHHH KGGDVEKEAYTGDGEHIHSDFLNGLDKAAAIEKMIQWLEENGKGEKKVTYRLRDWLFSRQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RYWGEPIPIIHWEDGTSTPVPEEELPLILPKTSEIKPSGTGESPLANIKEWVEVTDPETG HHCCCCCCEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC KKGRRETNTMPQWAGSCWYFLRYIDPKNPNELASPEKLKEWLPVDMYIGGAEHAVLHLLY CCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEEEECCHHHHHHHHHH ARFWHKFLYDIGVVPTKEPFKQLYNQGMILGENNEKMSKSKGNVVNPDEIVETHGADTLR HHHHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCCHHHHCCCCCCCHHHHHHHCCCCHHH LYEMFMGPLDASIAWSTTGLDGARRFLDRVWRLFIDDNGGLNEKIVEGAGETLERVYHET HHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHH VMKVTDHFEGLRFNTGISQLMVFINEAYKADQLPKEYMEGFVKLLSPVAPHLAEELWNRL HHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GHEETIAYEAWPVYDEAKLVDDEIEIVVQLNGKVKAKLNVPADADKEQLEELAKNNEKVK CCCCEEEEECCCCCCCCHHCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHCHHHHH EQLEGKTIRKVIAVPGKLVNIVAN HHHCCHHHHHHHHCCCHHHHEECC >Mature Secondary Structure SFDHQTIEKKWQDYWLKNKTFATREDKSKPKFYALDMFPYPSGAGLHVGHPEGYTATDI CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCHHHH LSRMKRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPAVFTEQNIDNFRRQIRALGFSYDW HHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCC DREVNTTDPDYYKWTQWIFLKLYEKGLAYVDEVPVNWCPALGTVLANEEVIDGKSERGGH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCCCCCCC PVERRPMKQWMLKITAYADRLLEDLEELDWPESIKEMQRNWIGRSEGAHVHFAVDGTNET CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCE FTVFTTRPDTLFGATYAVLAPEHDLVQKITTPEQKDAVNAYIEEVQSKSDLERTDLAKTK EEEEECCCCCHHCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH TGVFTGAYAVNPANGEKIPVWIADYVLATYGTGAVMAVPAHDERDHEFASAFGLPIKEVV CCEEECEEEECCCCCCEEEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCHHHHH KGGDVEKEAYTGDGEHIHSDFLNGLDKAAAIEKMIQWLEENGKGEKKVTYRLRDWLFSRQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RYWGEPIPIIHWEDGTSTPVPEEELPLILPKTSEIKPSGTGESPLANIKEWVEVTDPETG HHCCCCCCEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC KKGRRETNTMPQWAGSCWYFLRYIDPKNPNELASPEKLKEWLPVDMYIGGAEHAVLHLLY CCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEEEECCHHHHHHHHHH ARFWHKFLYDIGVVPTKEPFKQLYNQGMILGENNEKMSKSKGNVVNPDEIVETHGADTLR HHHHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCCHHHHCCCCCCCHHHHHHHCCCCHHH LYEMFMGPLDASIAWSTTGLDGARRFLDRVWRLFIDDNGGLNEKIVEGAGETLERVYHET HHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHH VMKVTDHFEGLRFNTGISQLMVFINEAYKADQLPKEYMEGFVKLLSPVAPHLAEELWNRL HHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GHEETIAYEAWPVYDEAKLVDDEIEIVVQLNGKVKAKLNVPADADKEQLEELAKNNEKVK CCCCEEEEECCCCCCCCHHCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHCHHHHH EQLEGKTIRKVIAVPGKLVNIVAN HHHCCHHHHHHHHCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA