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The map label for this gene is yteT [H]

Identifier: 52786888

GI number: 52786888

Start: 3044324

End: 3045601

Strand: Reverse

Name: yteT [H]

Synonym: BLi03163

Alternate gene names: 52786888

Gene position: 3045601-3044324 (Counterclockwise)

Preceding gene: 52786889

Following gene: 52786887

Centisome position: 72.13

GC content: 50.55

Gene sequence:

>1278_bases
ATGAAAAAATATGCGATATGCGGTCTGAGCGGCCGCGCTTTTAACATGTTTATCGAGCCTCTGGTGGGAAAATACGGGAA
AGAAAACCGCATCGCTGCGCTCTTGGACATCGATCCGCTGAGGGAGGAAGTCTGCAAAGAAAGGTTTCCGGCGCTTCGCC
CCGTCCCGTTTTTCGAAGAGAAAGCGTTTACCGAAATGCTTGACAAAATCAAGCCGGACGCCATTATTGTAGCAGGCCGT
GATGATACGCATGTCCGCTATATATTGGGCGCTTTACGGGCAGATATTGACGTGATCACTGAAAAGCCGATGGTGACAAC
GGCACGGGATGCGGCAGCCGTGTTAAAAGCCGAAGCCGAGAGCAAAGGAAAAGTGACCGTTACGTTTAACTATCGCTACA
ATCCGTACCACCGCAAGATCAAAGAGCTGATACTTGACGGAAAGCTTGGCACGATTACGTCGGTTGATTTGAACTGGTAC
ATCGATACGTATCACGGCGCAAGCTATTTTAAACGCTGGAACAGGATGAGAGCATTCTCAGGCGGTCTTTCCGTCCATAA
GTCAACCCATCATTTCGATCTTGTCAATTGGTGGCTTGATCAAACGCCCAGCGAGGTTTTTGCCTACGGCGGTCTGTACT
ACTACGGACCCCGCGGCGAAATGAATCCTGAAAAAGGGGAAAACCGCTATTGCGGAACATGCCATGTCAAGAAGAAATGC
CGCTATTATATGAGGTGGCAGGCAGGCGACCCGCAGGACGACCATGTCAAGACCAATGAAAGCCAGCATCTGCTCTATAC
CGATTACAGGCCTGACGCGTGTATTTTCGATGAAGAAATCGACATCGAGGATACGTATGCAGCCGTTTTGAAATACGGCA
AAGGGGCGCTGCTGAATTACTCCGTTCATTTTTCAGCCCCGTATGAAGGCTACCGGCTTGCAATCAACGGGACAAAGGGA
AGGCTTGAAACACAGGAATATCATGCTCCGGCAAGAGTCCCATTTGAAGTTCCCGAACAGACCATCGATTATTATCCGCT
GTTTGAATCGAAAGAAACGATTCGCGTCGTCAGGCAGCCCGGCGGGCATGGCGGAGGAGACCCGCTGCTTTTGGAGGAGC
TGTTTGGCGGAGGAGACCCTTTGAGGAATTACGACATTCTGGCCGGTGCCGAAGCAGGCGCCTATTCAATTGCAGCCGGC
GAGGCATTGTGGCGCTCCATCAAAGAAAAAAAGCCGATAGGAATCAGTGAACTTCTGCATACCCGGCAATATACATAA

Upstream 100 bases:

>100_bases
GATATGGCAGCTTTCATACCGGTTTATGCGAAGAAAACCCCTGAAGCGACGGAACTCATCGAAGCGCTTCAAGCAAAATG
AATGAAAGGGGGAGGAGCCG

Downstream 100 bases:

>100_bases
AGGGGGAGAGAAATTCATGGAACAAAACGTCTCCATGGGAAGGGTGCTGAGCTTTTGTGAATGGGTGCTGAAGTTTTTTT
ACGCCAATCTGCTGTGGTTT

Product: YteT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKKYAICGLSGRAFNMFIEPLVGKYGKENRIAALLDIDPLREEVCKERFPALRPVPFFEEKAFTEMLDKIKPDAIIVAGR
DDTHVRYILGALRADIDVITEKPMVTTARDAAAVLKAEAESKGKVTVTFNYRYNPYHRKIKELILDGKLGTITSVDLNWY
IDTYHGASYFKRWNRMRAFSGGLSVHKSTHHFDLVNWWLDQTPSEVFAYGGLYYYGPRGEMNPEKGENRYCGTCHVKKKC
RYYMRWQAGDPQDDHVKTNESQHLLYTDYRPDACIFDEEIDIEDTYAAVLKYGKGALLNYSVHFSAPYEGYRLAINGTKG
RLETQEYHAPARVPFEVPEQTIDYYPLFESKETIRVVRQPGGHGGGDPLLLEELFGGGDPLRNYDILAGAEAGAYSIAAG
EALWRSIKEKKPIGISELLHTRQYT

Sequences:

>Translated_425_residues
MKKYAICGLSGRAFNMFIEPLVGKYGKENRIAALLDIDPLREEVCKERFPALRPVPFFEEKAFTEMLDKIKPDAIIVAGR
DDTHVRYILGALRADIDVITEKPMVTTARDAAAVLKAEAESKGKVTVTFNYRYNPYHRKIKELILDGKLGTITSVDLNWY
IDTYHGASYFKRWNRMRAFSGGLSVHKSTHHFDLVNWWLDQTPSEVFAYGGLYYYGPRGEMNPEKGENRYCGTCHVKKKC
RYYMRWQAGDPQDDHVKTNESQHLLYTDYRPDACIFDEEIDIEDTYAAVLKYGKGALLNYSVHFSAPYEGYRLAINGTKG
RLETQEYHAPARVPFEVPEQTIDYYPLFESKETIRVVRQPGGHGGGDPLLLEELFGGGDPLRNYDILAGAEAGAYSIAAG
EALWRSIKEKKPIGISELLHTRQYT
>Mature_425_residues
MKKYAICGLSGRAFNMFIEPLVGKYGKENRIAALLDIDPLREEVCKERFPALRPVPFFEEKAFTEMLDKIKPDAIIVAGR
DDTHVRYILGALRADIDVITEKPMVTTARDAAAVLKAEAESKGKVTVTFNYRYNPYHRKIKELILDGKLGTITSVDLNWY
IDTYHGASYFKRWNRMRAFSGGLSVHKSTHHFDLVNWWLDQTPSEVFAYGGLYYYGPRGEMNPEKGENRYCGTCHVKKKC
RYYMRWQAGDPQDDHVKTNESQHLLYTDYRPDACIFDEEIDIEDTYAAVLKYGKGALLNYSVHFSAPYEGYRLAINGTKG
RLETQEYHAPARVPFEVPEQTIDYYPLFESKETIRVVRQPGGHGGGDPLLLEELFGGGDPLRNYDILAGAEAGAYSIAAG
EALWRSIKEKKPIGISELLHTRQYT

Specific function: May play a role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 48417; Mature: 48417

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS50143 BIR_REPEAT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYAICGLSGRAFNMFIEPLVGKYGKENRIAALLDIDPLREEVCKERFPALRPVPFFEE
CCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHH
KAFTEMLDKIKPDAIIVAGRDDTHVRYILGALRADIDVITEKPMVTTARDAAAVLKAEAE
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHCCCCCCEEEHHHHHHHHHHCCC
SKGKVTVTFNYRYNPYHRKIKELILDGKLGTITSVDLNWYIDTYHGASYFKRWNRMRAFS
CCCCEEEEEEEECCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHC
GGLSVHKSTHHFDLVNWWLDQTPSEVFAYGGLYYYGPRGEMNPEKGENRYCGTCHVKKKC
CCCEECCCCCCHHHHHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEHHCCC
RYYMRWQAGDPQDDHVKTNESQHLLYTDYRPDACIFDEEIDIEDTYAAVLKYGKGALLNY
CEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEE
SVHFSAPYEGYRLAINGTKGRLETQEYHAPARVPFEVPEQTIDYYPLFESKETIRVVRQP
EEEECCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHEECC
GGHGGGDPLLLEELFGGGDPLRNYDILAGAEAGAYSIAAGEALWRSIKEKKPIGISELLH
CCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHH
TRQYT
HCCCC
>Mature Secondary Structure
MKKYAICGLSGRAFNMFIEPLVGKYGKENRIAALLDIDPLREEVCKERFPALRPVPFFEE
CCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHH
KAFTEMLDKIKPDAIIVAGRDDTHVRYILGALRADIDVITEKPMVTTARDAAAVLKAEAE
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHCCCCCCEEEHHHHHHHHHHCCC
SKGKVTVTFNYRYNPYHRKIKELILDGKLGTITSVDLNWYIDTYHGASYFKRWNRMRAFS
CCCCEEEEEEEECCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHC
GGLSVHKSTHHFDLVNWWLDQTPSEVFAYGGLYYYGPRGEMNPEKGENRYCGTCHVKKKC
CCCEECCCCCCHHHHHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEHHCCC
RYYMRWQAGDPQDDHVKTNESQHLLYTDYRPDACIFDEEIDIEDTYAAVLKYGKGALLNY
CEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEE
SVHFSAPYEGYRLAINGTKGRLETQEYHAPARVPFEVPEQTIDYYPLFESKETIRVVRQP
EEEECCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHEECC
GGHGGGDPLLLEELFGGGDPLRNYDILAGAEAGAYSIAAGEALWRSIKEKKPIGISELLH
CCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHH
TRQYT
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]