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The map label for this gene is ytpQ

Identifier: 52786859

GI number: 52786859

Start: 3016993

End: 3017802

Strand: Reverse

Name: ytpQ

Synonym: BLi03134

Alternate gene names: NA

Gene position: 3017802-3016993 (Counterclockwise)

Preceding gene: 52786860

Following gene: 52786858

Centisome position: 71.47

GC content: 47.28

Gene sequence:

>810_bases
ATGAAAATGACCTCAAGGAAACTTTCCGATATATTAAAAAAACGTTTGCAAAATGACAGCTGGTCCTTTCATTTCGACAG
GGAAAAGGACAGCTTGAGAATCGAAGATAAAAACACTGGAAAAGGCATTACACTCGAGCTCCCGGGGATCATCGCGAAAT
GGGAGCAGAAAAAAGATGATGCGATTGACGAAGTCGTCTATTATACTGAGGAAGCGCTCAACGCCATGAAAGGCCAGTCG
CAGGAAATGGAAGGACGGGAAAGCCTGATCTATCCCGTCATCCGCTCAACTTCCTTTCCCGAGAAGTCCAGCGCAGGCGT
TCCCTTGGTTTTTGACGGCCACACGGCTGAAACACGAATTTACTATGCGCTCGACCTTGGCAACACATACCGTCTGATCG
ACGAAAAAATGCTTGAAAAAGAGGGCTGGACAAAAGAAAGGATTCGGGAAACAGCTTCCTTTAACCTTCGCTCGCTCCAG
ACCGTTGTAAAAGAAGACGAAGTCGCAGGCAATCACTTCTACTTTTTCAGAGCGAATGACGGCTATGACGCCAGCAGGGT
GTTGAACGAATCGATTCTCGCAGAGTATGAGAAAAACGCGGAAGGGACCCTCGCCGTGTCAATTCCGCACCAGGATGTGC
TGATTATTGCCGACATCCGCAATAATGCCGGATACGATATACTCGGGCAAATGTCGATGAGCTTTTTTGCAAACGGCACA
GTGCCGATCACTGCGCTTTCTTTCCTGTATGAGGATGGAAAGCTTGAACCGATCTTTATTCTGGCTAAAAACCGCCCTAA
AAAGAAATGA

Upstream 100 bases:

>100_bases
GAAATCAGCCGCTTTGTCAGCAAAGACCGGAAAACGAAAGAGGAAATCGAGCAATTTTTGACCGATTCACTGAATAAGTA
GCCGAAAGGAGAGTTCCTCT

Downstream 100 bases:

>100_bases
TAGAAAGGAATTTTTCTCATGAACGCATTTTATAATCCAGAAGGCGTAGGCGATACGCTGCTCATCTCATTGAACGATAT
TCCACGTGAAGAGATCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKMTSRKLSDILKKRLQNDSWSFHFDREKDSLRIEDKNTGKGITLELPGIIAKWEQKKDDAIDEVVYYTEEALNAMKGQS
QEMEGRESLIYPVIRSTSFPEKSSAGVPLVFDGHTAETRIYYALDLGNTYRLIDEKMLEKEGWTKERIRETASFNLRSLQ
TVVKEDEVAGNHFYFFRANDGYDASRVLNESILAEYEKNAEGTLAVSIPHQDVLIIADIRNNAGYDILGQMSMSFFANGT
VPITALSFLYEDGKLEPIFILAKNRPKKK

Sequences:

>Translated_269_residues
MKMTSRKLSDILKKRLQNDSWSFHFDREKDSLRIEDKNTGKGITLELPGIIAKWEQKKDDAIDEVVYYTEEALNAMKGQS
QEMEGRESLIYPVIRSTSFPEKSSAGVPLVFDGHTAETRIYYALDLGNTYRLIDEKMLEKEGWTKERIRETASFNLRSLQ
TVVKEDEVAGNHFYFFRANDGYDASRVLNESILAEYEKNAEGTLAVSIPHQDVLIIADIRNNAGYDILGQMSMSFFANGT
VPITALSFLYEDGKLEPIFILAKNRPKKK
>Mature_269_residues
MKMTSRKLSDILKKRLQNDSWSFHFDREKDSLRIEDKNTGKGITLELPGIIAKWEQKKDDAIDEVVYYTEEALNAMKGQS
QEMEGRESLIYPVIRSTSFPEKSSAGVPLVFDGHTAETRIYYALDLGNTYRLIDEKMLEKEGWTKERIRETASFNLRSLQ
TVVKEDEVAGNHFYFFRANDGYDASRVLNESILAEYEKNAEGTLAVSIPHQDVLIIADIRNNAGYDILGQMSMSFFANGT
VPITALSFLYEDGKLEPIFILAKNRPKKK

Specific function: Unknown

COG id: COG4848

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0354 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3134_BACLD (Q65G19)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_080274.1
- RefSeq:   YP_092688.1
- STRING:   Q65G19
- EnsemblBacteria:   EBBACT00000054490
- EnsemblBacteria:   EBBACT00000058977
- GeneID:   3028152
- GeneID:   3098861
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi03134
- KEGG:   bli:BL00047
- NMPDR:   fig|279010.5.peg.106
- eggNOG:   COG4848
- GeneTree:   EBGT00050000002339
- HOGENOM:   HBG314016
- OMA:   IYPVIRS
- ProtClustDB:   PRK13668
- BioCyc:   BLIC279010-1:BLI03134-MONOMER
- BioCyc:   BLIC279010:BL00047-MONOMER
- HAMAP:   MF_01548
- InterPro:   IPR010838
- PIRSF:   PIRSF012562

Pfam domain/function: PF07285 DUF1444

EC number: NA

Molecular weight: Translated: 30726; Mature: 30726

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTSRKLSDILKKRLQNDSWSFHFDREKDSLRIEDKNTGKGITLELPGIIAKWEQKKDD
CCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCEEEEECCCHHHHHHCCCCH
AIDEVVYYTEEALNAMKGQSQEMEGRESLIYPVIRSTSFPEKSSAGVPLVFDGHTAETRI
HHHHHHHHHHHHHHHHCCCCHHCCCCHHEEHHHHHCCCCCCCCCCCCCEEECCCCCCEEE
YYALDLGNTYRLIDEKMLEKEGWTKERIRETASFNLRSLQTVVKEDEVAGNHFYFFRAND
EEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCC
GYDASRVLNESILAEYEKNAEGTLAVSIPHQDVLIIADIRNNAGYDILGQMSMSFFANGT
CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCCC
VPITALSFLYEDGKLEPIFILAKNRPKKK
CHHHHHHHHHCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKMTSRKLSDILKKRLQNDSWSFHFDREKDSLRIEDKNTGKGITLELPGIIAKWEQKKDD
CCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCEEEEECCCHHHHHHCCCCH
AIDEVVYYTEEALNAMKGQSQEMEGRESLIYPVIRSTSFPEKSSAGVPLVFDGHTAETRI
HHHHHHHHHHHHHHHHCCCCHHCCCCHHEEHHHHHCCCCCCCCCCCCCEEECCCCCCEEE
YYALDLGNTYRLIDEKMLEKEGWTKERIRETASFNLRSLQTVVKEDEVAGNHFYFFRAND
EEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCC
GYDASRVLNESILAEYEKNAEGTLAVSIPHQDVLIIADIRNNAGYDILGQMSMSFFANGT
CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCCC
VPITALSFLYEDGKLEPIFILAKNRPKKK
CHHHHHHHHHCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA