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The map label for this gene is rapC [H]

Identifier: 52786710

GI number: 52786710

Start: 2864067

End: 2865176

Strand: Direct

Name: rapC [H]

Synonym: BLi02978

Alternate gene names: 52786710

Gene position: 2864067-2865176 (Clockwise)

Preceding gene: 52786697

Following gene: 52786711

Centisome position: 67.83

GC content: 35.5

Gene sequence:

>1110_bases
TTGGTTGTTAAAATACGATCCGAAAAGGTCGGGAATATGTTGAATCAATGGTATGCAACAATTAAGTTACAGCAAGTTCA
TAAAGCAACTCAAATGAAGAAAGAAATTCAGAAGGCTATTGATAATATGGAGAAGAATCAAGATGTTTTGCTTTATTTCA
ATATGATAGATTCTCGGTATAAATTATTGATCGAAAAATATAACGAATCCGGAAGCATCTTAAAAAGTCTTAAGTATAGA
GCTGAAGAAAAGAAGACGGACGACATGCTTCAGTATTACTTTTACTTTTTCAGCGGGCTGTATCAGTTTTACATAAAGAA
CTTTACGAAAGCCATTAATTTTTATCGCATTGCTGAAAATTGGATAAATAAAATACCAGACGAAGCAGAACGAGCAGAAT
TCAATTATCAAATTGCTATTGCATATTATGAAATTCACCAAAATTTTTTCTCGTTAACACACGCAGAAAAAGCGCTCGAA
AGCTTTTTAGCCCTTGGAAATTATGAAAATAGGGCAGCAACCACTCAAATGATAATTGCGGCAAACAGACTGGATCTACA
TCAATACGAATTAACTGAGTCCGTATATAAAAAAGCAATAAAAATGGCTGCTGATACCCGACAAAATTACGTTGAGGGAC
TCGGACATCACAATCTCGGTCTTGCTTACGAACGACAAGAAAAACTCGATTTAGCGCGTGAATCCTTCGAAATAGCTCTC
GACATTTTTGAAAATCTACATTCCAAAATCGCAATCATCAGAACTTCTTATATGCTGGCAAGGGTTTTATTCAAGAAAGG
TTTATTCGAAGAAGGGACACATTGGTATCAAAAAGCCCTCAATCTCGCAAAAGAAATAAACGAAAAAACGTACGAAGCCA
AGTTATTAGTCATACACTCAATATATAAAGAGTTGGATAAGACCTTATTAGATAAAGGATTGAATATGCTAAGAGACAAA
AAGCTTTGGTCAGACGTAGCAGATTTAGCTATCATTGCAGCAAGACACTTCAAAAAGAAGGAATATCATGAATTAGCGGC
GAAATACTTCGATGAAGGAGTAGTCGCTCGCGACAAAATTCAAACATGGACGGAGGAACTTGTCTCATGA

Upstream 100 bases:

>100_bases
AAATGATCCTTTCTGTAAAATGAAAGGTATGCAGAAAAAGGAAATGGATACTTATTTTTTTGAATATTTCAAATCAATTA
TACGAAAGGAATGGTGGGAA

Downstream 100 bases:

>100_bases
AAAAATTACTTTTAGGTGCAGTAATAACAGGTGTATTTTTAACTGGTATTTTAAACTTTACTACTCAAGGAAAAGCTGAA
TTCGGTACTGGAGACTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MVVKIRSEKVGNMLNQWYATIKLQQVHKATQMKKEIQKAIDNMEKNQDVLLYFNMIDSRYKLLIEKYNESGSILKSLKYR
AEEKKTDDMLQYYFYFFSGLYQFYIKNFTKAINFYRIAENWINKIPDEAERAEFNYQIAIAYYEIHQNFFSLTHAEKALE
SFLALGNYENRAATTQMIIAANRLDLHQYELTESVYKKAIKMAADTRQNYVEGLGHHNLGLAYERQEKLDLARESFEIAL
DIFENLHSKIAIIRTSYMLARVLFKKGLFEEGTHWYQKALNLAKEINEKTYEAKLLVIHSIYKELDKTLLDKGLNMLRDK
KLWSDVADLAIIAARHFKKKEYHELAAKYFDEGVVARDKIQTWTEELVS

Sequences:

>Translated_369_residues
MVVKIRSEKVGNMLNQWYATIKLQQVHKATQMKKEIQKAIDNMEKNQDVLLYFNMIDSRYKLLIEKYNESGSILKSLKYR
AEEKKTDDMLQYYFYFFSGLYQFYIKNFTKAINFYRIAENWINKIPDEAERAEFNYQIAIAYYEIHQNFFSLTHAEKALE
SFLALGNYENRAATTQMIIAANRLDLHQYELTESVYKKAIKMAADTRQNYVEGLGHHNLGLAYERQEKLDLARESFEIAL
DIFENLHSKIAIIRTSYMLARVLFKKGLFEEGTHWYQKALNLAKEINEKTYEAKLLVIHSIYKELDKTLLDKGLNMLRDK
KLWSDVADLAIIAARHFKKKEYHELAAKYFDEGVVARDKIQTWTEELVS
>Mature_369_residues
MVVKIRSEKVGNMLNQWYATIKLQQVHKATQMKKEIQKAIDNMEKNQDVLLYFNMIDSRYKLLIEKYNESGSILKSLKYR
AEEKKTDDMLQYYFYFFSGLYQFYIKNFTKAINFYRIAENWINKIPDEAERAEFNYQIAIAYYEIHQNFFSLTHAEKALE
SFLALGNYENRAATTQMIIAANRLDLHQYELTESVYKKAIKMAADTRQNYVEGLGHHNLGLAYERQEKLDLARESFEIAL
DIFENLHSKIAIIRTSYMLARVLFKKGLFEEGTHWYQKALNLAKEINEKTYEAKLLVIHSIYKELDKTLLDKGLNMLRDK
KLWSDVADLAIIAARHFKKKEYHELAAKYFDEGVVARDKIQTWTEELVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 43618; Mature: 43618

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVKIRSEKVGNMLNQWYATIKLQQVHKATQMKKEIQKAIDNMEKNQDVLLYFNMIDSRY
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH
KLLIEKYNESGSILKSLKYRAEEKKTDDMLQYYFYFFSGLYQFYIKNFTKAINFYRIAEN
HHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WINKIPDEAERAEFNYQIAIAYYEIHQNFFSLTHAEKALESFLALGNYENRAATTQMIIA
HHHHCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ANRLDLHQYELTESVYKKAIKMAADTRQNYVEGLGHHNLGLAYERQEKLDLARESFEIAL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
DIFENLHSKIAIIRTSYMLARVLFKKGLFEEGTHWYQKALNLAKEINEKTYEAKLLVIHS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYKELDKTLLDKGLNMLRDKKLWSDVADLAIIAARHFKKKEYHELAAKYFDEGVVARDKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QTWTEELVS
HHHHHHHCC
>Mature Secondary Structure
MVVKIRSEKVGNMLNQWYATIKLQQVHKATQMKKEIQKAIDNMEKNQDVLLYFNMIDSRY
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH
KLLIEKYNESGSILKSLKYRAEEKKTDDMLQYYFYFFSGLYQFYIKNFTKAINFYRIAEN
HHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WINKIPDEAERAEFNYQIAIAYYEIHQNFFSLTHAEKALESFLALGNYENRAATTQMIIA
HHHHCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ANRLDLHQYELTESVYKKAIKMAADTRQNYVEGLGHHNLGLAYERQEKLDLARESFEIAL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
DIFENLHSKIAIIRTSYMLARVLFKKGLFEEGTHWYQKALNLAKEINEKTYEAKLLVIHS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYKELDKTLLDKGLNMLRDKKLWSDVADLAIIAARHFKKKEYHELAAKYFDEGVVARDKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QTWTEELVS
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]