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The map label for this gene is yrkF [H]

Identifier: 52786528

GI number: 52786528

Start: 2681630

End: 2682202

Strand: Reverse

Name: yrkF [H]

Synonym: BLi02793

Alternate gene names: 52786528

Gene position: 2682202-2681630 (Counterclockwise)

Preceding gene: 52786529

Following gene: 52786527

Centisome position: 63.52

GC content: 42.93

Gene sequence:

>573_bases
ATGAACATCAAAACTGATCGCGTATTAGATGCAAAAGGGCTTGCTTGTCCAATGCCCGTCGTAAAAACGAAAAAAGCCAT
GAATGAGTTAAAACCGGGGCAGGTAATTGAAGTGCATGCTACTGATAAAGGGTCTCTTGCTGATATACGGGCATGGGCAA
AGGGAAGCGGTCACCAGTATCTCGGTACAACAGAAGACGGAGATATATTAAAGCATTATCTTCGAAAAGCGGGTCACTCT
GAAATAAAGAAAGTAAAAACGTTTCCTTATACGATTCAAAATGAAGAGCTTCAAAAAAAGGTAGAGGCGGGCGAGCGGCT
AACAGTAGTTGATGTTCGGGAACCTGCAGAATACCGTTTCGGCCATATTCCCGGAGCGATTTCAATTCCATTAGGTGAAC
TTGAAAAAAGAGCGCACGAACTGAATAGAGACGGGAAAATTTATGTTGTTTGCCGTACGGGTAATAGAAGCGATCTGGCA
GCTAAACAGCTTGCGGATAATGGCTTTAAAGATGTTGAAAATGTTGTCCAAGGTATGGCGGAGTGGTCAGGCCCTGTTGA
AAAAAATCAATAA

Upstream 100 bases:

>100_bases
AATTGAACGGTTGCTTCTTCGGGAATGCAAAACAGGAAATCCTGAAGCAGCCAAATGGAACAGTGATATAAAACAGAAAA
TGAATATGGAGGGATGATTG

Downstream 100 bases:

>100_bases
AAGAAAAATTGGAGGAATGATTTGAATGGCCGTAAAAGTTGCAATCATTGCAACAAGTTCTGATGCCATTTGGGCTCTAA
CATTTTAAGGAGGTTTAAAT

Product: YrkF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNIKTDRVLDAKGLACPMPVVKTKKAMNELKPGQVIEVHATDKGSLADIRAWAKGSGHQYLGTTEDGDILKHYLRKAGHS
EIKKVKTFPYTIQNEELQKKVEAGERLTVVDVREPAEYRFGHIPGAISIPLGELEKRAHELNRDGKIYVVCRTGNRSDLA
AKQLADNGFKDVENVVQGMAEWSGPVEKNQ

Sequences:

>Translated_190_residues
MNIKTDRVLDAKGLACPMPVVKTKKAMNELKPGQVIEVHATDKGSLADIRAWAKGSGHQYLGTTEDGDILKHYLRKAGHS
EIKKVKTFPYTIQNEELQKKVEAGERLTVVDVREPAEYRFGHIPGAISIPLGELEKRAHELNRDGKIYVVCRTGNRSDLA
AKQLADNGFKDVENVVQGMAEWSGPVEKNQ
>Mature_190_residues
MNIKTDRVLDAKGLACPMPVVKTKKAMNELKPGQVIEVHATDKGSLADIRAWAKGSGHQYLGTTEDGDILKHYLRKAGHS
EIKKVKTFPYTIQNEELQKKVEAGERLTVVDVREPAEYRFGHIPGAISIPLGELEKRAHELNRDGKIYVVCRTGNRSDLA
AKQLADNGFKDVENVVQGMAEWSGPVEKNQ

Specific function: Unknown

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 21087; Mature: 21087

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3 ; PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKTDRVLDAKGLACPMPVVKTKKAMNELKPGQVIEVHATDKGSLADIRAWAKGSGHQY
CCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCC
LGTTEDGDILKHYLRKAGHSEIKKVKTFPYTIQNEELQKKVEAGERLTVVDVREPAEYRF
CCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEECCHHHHHHHHCCCEEEEEECCCCCHHHC
GHIPGAISIPLGELEKRAHELNRDGKIYVVCRTGNRSDLAAKQLADNGFKDVENVVQGMA
CCCCCEEECCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHH
EWSGPVEKNQ
HHCCCCCCCC
>Mature Secondary Structure
MNIKTDRVLDAKGLACPMPVVKTKKAMNELKPGQVIEVHATDKGSLADIRAWAKGSGHQY
CCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCC
LGTTEDGDILKHYLRKAGHSEIKKVKTFPYTIQNEELQKKVEAGERLTVVDVREPAEYRF
CCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEECCHHHHHHHHCCCEEEEEECCCCCHHHC
GHIPGAISIPLGELEKRAHELNRDGKIYVVCRTGNRSDLAAKQLADNGFKDVENVVQGMA
CCCCCEEECCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHH
EWSGPVEKNQ
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]