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The map label for this gene is yqxD [C]

Identifier: 52786449

GI number: 52786449

Start: 2610480

End: 2610971

Strand: Reverse

Name: yqxD [C]

Synonym: BLi02714

Alternate gene names: 52786449

Gene position: 2610971-2610480 (Counterclockwise)

Preceding gene: 52786450

Following gene: 52786448

Centisome position: 61.83

GC content: 45.53

Gene sequence:

>492_bases
ATGGAGGGATGGAGAATTAGTCTTCTTGAAAAAGAAAGGACGATTTTTGTCGATGCAGACGCATGCCCGGTGAAAGATGA
AGTGCTCAAAACAGCGGCGGATTTCGACGTAAAGGTGGTATTCGTGGCTTCATTCGAGCATTTTCAAATCACAAGGAAAG
AAGAAGAGAATTGGACATATGTCGATCCGCACAAAGAAGCAGCGGATCTGTACATTGCCAACCATGTTCGACCTGGTGAT
GTCGTCGTCACACAAGATATCGGGCTGGCATCGCTTTTGCTTGGCAAAAAGGTCTATGTGATGTCGGAGAGAGGCTATCT
TTTCGAAGAGAACTCCATCGATCATGCTCTTTTCCGCCGTCACGTCGCACAAAAATTGAGAAGAAGCGGACGTTACACGA
AAGGCCCGAAAAAACTGGTCAAGGAAGACCGGGAGCGATTTGTCAAAGAGCTGCAAAAAATCTTGTCGAAAATTGAAGGA
TTTACGTACTAA

Upstream 100 bases:

>100_bases
TCGTGTCAAGAATTTCCCGAAAAAAACTTTCGACAAATTCTTATAGATCGATTAATTTTGAAACCTGTGTGATTTTGCCT
GTATTTATAGCAGGAGATTG

Downstream 100 bases:

>100_bases
GCAGCGAATTATGTACGACGGAGTGTTGGAACATGGGCAATCGTATACCAGACGAAATTGTAGAACAGGTGCAGAAATCA
GCTGATATCGTAGAAGTTAT

Product: YqxD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MEGWRISLLEKERTIFVDADACPVKDEVLKTAADFDVKVVFVASFEHFQITRKEEENWTYVDPHKEAADLYIANHVRPGD
VVVTQDIGLASLLLGKKVYVMSERGYLFEENSIDHALFRRHVAQKLRRSGRYTKGPKKLVKEDRERFVKELQKILSKIEG
FTY

Sequences:

>Translated_163_residues
MEGWRISLLEKERTIFVDADACPVKDEVLKTAADFDVKVVFVASFEHFQITRKEEENWTYVDPHKEAADLYIANHVRPGD
VVVTQDIGLASLLLGKKVYVMSERGYLFEENSIDHALFRRHVAQKLRRSGRYTKGPKKLVKEDRERFVKELQKILSKIEG
FTY
>Mature_163_residues
MEGWRISLLEKERTIFVDADACPVKDEVLKTAADFDVKVVFVASFEHFQITRKEEENWTYVDPHKEAADLYIANHVRPGD
VVVTQDIGLASLLLGKKVYVMSERGYLFEENSIDHALFRRHVAQKLRRSGRYTKGPKKLVKEDRERFVKELQKILSKIEG
FTY

Specific function: Unknown

COG id: COG1671

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0178 family

Homologues:

Organism=Escherichia coli, GI87081732, Length=142, Percent_Identity=32.3943661971831, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3680_BACLD (Q65H79)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_079860.1
- RefSeq:   YP_092278.1
- STRING:   Q65H79
- EnsemblBacteria:   EBBACT00000055821
- EnsemblBacteria:   EBBACT00000059735
- GeneID:   3028750
- GeneID:   3097680
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi02714
- KEGG:   bli:BL03680
- NMPDR:   fig|279010.5.peg.557
- eggNOG:   COG1671
- GeneTree:   EBGT00050000002200
- HOGENOM:   HBG363074
- OMA:   PLASRCV
- ProtClustDB:   CLSK887593
- BioCyc:   BLIC279010-1:BLI02714-MONOMER
- BioCyc:   BLIC279010:BL03680-MONOMER
- HAMAP:   MF_00489
- InterPro:   IPR003791

Pfam domain/function: PF02639 DUF188

EC number: NA

Molecular weight: Translated: 18976; Mature: 18976

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGWRISLLEKERTIFVDADACPVKDEVLKTAADFDVKVVFVASFEHFQITRKEEENWTY
CCCCEEEEEECCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCE
VDPHKEAADLYIANHVRPGDVVVTQDIGLASLLLGKKVYVMSERGYLFEENSIDHALFRR
ECCCCCHHHEEEECCCCCCCEEEECCCCHHHHHHCCEEEEEECCCCEEECCCCCHHHHHH
HVAQKLRRSGRYTKGPKKLVKEDRERFVKELQKILSKIEGFTY
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEGWRISLLEKERTIFVDADACPVKDEVLKTAADFDVKVVFVASFEHFQITRKEEENWTY
CCCCEEEEEECCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCE
VDPHKEAADLYIANHVRPGDVVVTQDIGLASLLLGKKVYVMSERGYLFEENSIDHALFRR
ECCCCCHHHEEEECCCCCCCEEEECCCCHHHHHHCCEEEEEECCCCEEECCCCCHHHHHH
HVAQKLRRSGRYTKGPKKLVKEDRERFVKELQKILSKIEGFTY
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA