Click here to switch to the map view.

The map label for this gene is cccA [H]

Identifier: 52786446

GI number: 52786446

Start: 2606580

End: 2606939

Strand: Reverse

Name: cccA [H]

Synonym: BLi02710

Alternate gene names: 52786446

Gene position: 2606939-2606580 (Counterclockwise)

Preceding gene: 52786447

Following gene: 52786445

Centisome position: 61.74

GC content: 45.0

Gene sequence:

>360_bases
ATGAACCGCAATCCATTGATACCATTTTTGTTAATCGCCATTATGGGCATAGGACTGGTTTTTATCTTATCTATAAAAGG
CCTTTATGACGCAAAAGAAATTGCAGGCGAAGGGAATAAAACAGCTCAAGAAGACAAAGCCGATGCTTCGCCTGAAGAAA
TTTACAAAGCGAACTGTGTAACCTGCCACGGCGAGAATTATGAAGGTGTGTCAGGCCCTAAACTGAAAGGCGTCGGGGAC
CGGATGGATACAGGTGCGATTAAAGAAAAGATTGAAAAAGGCGGCAACGGAATGCCGGGAGGACTGGTCCCGGCGGAAAA
GCTTGATGATATGGCCAAATGGGTGTCAGAGATTAAATAG

Upstream 100 bases:

>100_bases
TCAGCTTTTGTTTCATAACCGGTTTACTTTTTGTAAAATTAAAGTAGAATTAGAATTGTTTACATAAGGGGCAGGGGCAA
ATTAAAAAGGGGGATGTAAA

Downstream 100 bases:

>100_bases
CTTTCCCAGATTGGCTAAAACCGTTTAATCACTTAAAGGATTCGCAAAGAAAGCTTTGAAAAGAGCTTTCGGGCGAATCC
TTTTTCTGTTTTTGTTCAAT

Product: CccA

Products: NA

Alternate protein names: Cytochrome c A [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNRNPLIPFLLIAIMGIGLVFILSIKGLYDAKEIAGEGNKTAQEDKADASPEEIYKANCVTCHGENYEGVSGPKLKGVGD
RMDTGAIKEKIEKGGNGMPGGLVPAEKLDDMAKWVSEIK

Sequences:

>Translated_119_residues
MNRNPLIPFLLIAIMGIGLVFILSIKGLYDAKEIAGEGNKTAQEDKADASPEEIYKANCVTCHGENYEGVSGPKLKGVGD
RMDTGAIKEKIEKGGNGMPGGLVPAEKLDDMAKWVSEIK
>Mature_119_residues
MNRNPLIPFLLIAIMGIGLVFILSIKGLYDAKEIAGEGNKTAQEDKADASPEEIYKANCVTCHGENYEGVSGPKLKGVGD
RMDTGAIKEKIEKGGNGMPGGLVPAEKLDDMAKWVSEIK

Specific function: Not essential for growth on minimal or rich media [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012218
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12721; Mature: 12721

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRNPLIPFLLIAIMGIGLVFILSIKGLYDAKEIAGEGNKTAQEDKADASPEEIYKANCV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCE
TCHGENYEGVSGPKLKGVGDRMDTGAIKEKIEKGGNGMPGGLVPAEKLDDMAKWVSEIK
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRNPLIPFLLIAIMGIGLVFILSIKGLYDAKEIAGEGNKTAQEDKADASPEEIYKANCV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCE
TCHGENYEGVSGPKLKGVGDRMDTGAIKEKIEKGGNGMPGGLVPAEKLDDMAKWVSEIK
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2166045; 8969508; 9384377; 8383048 [H]