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The map label for this gene is yndF [H]

Identifier: 52785976

GI number: 52785976

Start: 2189026

End: 2189580

Strand: Reverse

Name: yndF [H]

Synonym: BLi02231

Alternate gene names: 52785976

Gene position: 2189580-2189026 (Counterclockwise)

Preceding gene: 52785978

Following gene: 52785973

Centisome position: 51.85

GC content: 40.54

Gene sequence:

>555_bases
TTGTTTGGTGCCGACGGGGAAGTCAAATATGCAGGAGCTGTTGCCATTAACGGAAAAACAAATAAGCTCCTTGGTTTTTT
AGATGAAAAAGATTTAGACGGGATCATGTGGATCAAAGGACAAGGGGTAGGGGGCACTGTCAAAAACTATGATCAAAAAA
CAAAAAAATTGACGGCCATGTCAGTCGATCACCTTAAGAGTGAGATCAAGCCAGTCTTCAAAGGAAACCGCCTCTCATTT
AAAGTGAATATTAATTCAGAGGCACACCTGGCTGAAAACTGGAATACAACCGAAACGGCAATTGACAAAAAATATTTGAA
AAGAAAGGAAGAAAGTGCGTCACAAACAGTGAAACAGCTGGTAGAGCAGATCACAGAAAAAATGCAGAAGGAATATAAAG
CCGACCTTGCCGGCTTCGGTGATGAAGTGAGGATCCACTATCCCTTTCTTTGGAGAAAGCTGAAGAAAAATTGGGATGAA
GTATTCACAGAAACCCCCATTCAATATGATGTGAACATCACGATTGAAGAATTTGGATCACAAAGTAGACATTAG

Upstream 100 bases:

>100_bases
ATGACATCCTGAGCGGTTCGGTCAGGCCAGTCCCCTTCAAAATCTTTAATGCTTAAACTCATAAATCTTCCTGATAGGTG
CATCATCTGAATCTTAATCG

Downstream 100 bases:

>100_bases
CTTAATCATGACTTTATAAAGGTGCACAAATAACAGCGAGGGGATAACGGGGAATGGGTGAGAATGCTTGGTCATAAACG
GTAAGTGTGTGTTTTATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MFGADGEVKYAGAVAINGKTNKLLGFLDEKDLDGIMWIKGQGVGGTVKNYDQKTKKLTAMSVDHLKSEIKPVFKGNRLSF
KVNINSEAHLAENWNTTETAIDKKYLKRKEESASQTVKQLVEQITEKMQKEYKADLAGFGDEVRIHYPFLWRKLKKNWDE
VFTETPIQYDVNITIEEFGSQSRH

Sequences:

>Translated_184_residues
MFGADGEVKYAGAVAINGKTNKLLGFLDEKDLDGIMWIKGQGVGGTVKNYDQKTKKLTAMSVDHLKSEIKPVFKGNRLSF
KVNINSEAHLAENWNTTETAIDKKYLKRKEESASQTVKQLVEQITEKMQKEYKADLAGFGDEVRIHYPFLWRKLKKNWDE
VFTETPIQYDVNITIEEFGSQSRH
>Mature_184_residues
MFGADGEVKYAGAVAINGKTNKLLGFLDEKDLDGIMWIKGQGVGGTVKNYDQKTKKLTAMSVDHLKSEIKPVFKGNRLSF
KVNINSEAHLAENWNTTETAIDKKYLKRKEESASQTVKQLVEQITEKMQKEYKADLAGFGDEVRIHYPFLWRKLKKNWDE
VFTETPIQYDVNITIEEFGSQSRH

Specific function: May be involved in spore germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 21035; Mature: 21035

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGADGEVKYAGAVAINGKTNKLLGFLDEKDLDGIMWIKGQGVGGTVKNYDQKTKKLTAM
CCCCCCCEEEEEEEEECCCCCHHEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
SVDHLKSEIKPVFKGNRLSFKVNINSEAHLAENWNTTETAIDKKYLKRKEESASQTVKQL
HHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VEQITEKMQKEYKADLAGFGDEVRIHYPFLWRKLKKNWDEVFTETPIQYDVNITIEEFGS
HHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCC
QSRH
CCCC
>Mature Secondary Structure
MFGADGEVKYAGAVAINGKTNKLLGFLDEKDLDGIMWIKGQGVGGTVKNYDQKTKKLTAM
CCCCCCCEEEEEEEEECCCCCHHEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
SVDHLKSEIKPVFKGNRLSFKVNINSEAHLAENWNTTETAIDKKYLKRKEESASQTVKQL
HHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VEQITEKMQKEYKADLAGFGDEVRIHYPFLWRKLKKNWDEVFTETPIQYDVNITIEEFGS
HHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCC
QSRH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]