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The map label for this gene is ylxY [H]

Identifier: 52785654

GI number: 52785654

Start: 1854568

End: 1855482

Strand: Direct

Name: ylxY [H]

Synonym: BLi01895

Alternate gene names: 52785654

Gene position: 1854568-1855482 (Clockwise)

Preceding gene: 52785653

Following gene: 52785655

Centisome position: 43.92

GC content: 45.9

Gene sequence:

>915_bases
ATGTCCTATCAGATGATGAACCGTCCGTATTCACAACATTACATAGATGCGATGAAAAAAGACGCGGTCACGGTTGCCGC
TCAAAAGGACGATTTGTACCAGGAGCTTTTGCAAAAAGCGCCTGAATATGAAGTGAAGGCCCAGAATGCGAAAATTGATC
ACATATGGAAAGCGATGCCCGGCTACAACGGCTTAAAAGTAAACATCGAAAAATCGTACAAAAAAATGAAACAGGCCGGT
GAATTTGATGAGAAACTGCTCGTTTATGACCAAGTGAAGCCTGACGTTCATTTAGAATCCTTAAAGCCTGAGCCGATCTA
CCGCGGACACCCGGATAAACCGATGGTATCGTTTATTATCAATGTCGCTTGGGGTAATGAATATTTAGAAGAGATGCTTC
CCGTCTTACAACAGCATCGTATCAAAGCCACCTTTTTTCTGGAGGGCAGATGGGTGAAGCATCACCCCGAGCTGGCCAAA
GCCATACAAAACGGCGGGCATGAAATCGGAAACCATTCATACAATCATCCGGATATGAGCAAACTGACGAGAGAACGTAT
TTCAGAACAGCTGCGGATGACAAATGAACAAATACAGGAAACGCTTGGCGTCAAGCCGAAGTGGTTCGCCCCGCCGAGCG
GCAGCTTCCGCAAAGAGGTTGTGGATCAGGCTCACAAGATGGGGATGGGAACGATCATGTGGACAGTTGATACGATCGAT
TGGCAGAAACCGCAGCCGGCCGTCTTACAGCAACGGGTATTAAGCAAAGTACATAACGGCGCCATGATATTAATGCATCC
GACAGATCCAACTGCAAAAAGTCTTGCCGTTTTGATACAGAACCTGCATGAAAAAGGCTATCAAATCGGAACTGTTTCAC
AGCTGATGAATGAAAAAAGGCTTGTTGAAGAATAG

Upstream 100 bases:

>100_bases
GGTTCTATCTTGTCCTTTTCTCACATATTTTGTGGGGAAGGGAGGAATACAATTGAAAGGAACGATTGTTCGGATTTCCG
TTTTTTTCTTTCTTTTGCTG

Downstream 100 bases:

>100_bases
GATGTGCGGCCCGTTCTTTGAATAGGAGGAACAAATTTGATTAAACGGTATACTTGTCAAAATGGGGTAAGAATCGTATT
CGAAAACAATCCCACCGTCC

Product: YlxY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSYQMMNRPYSQHYIDAMKKDAVTVAAQKDDLYQELLQKAPEYEVKAQNAKIDHIWKAMPGYNGLKVNIEKSYKKMKQAG
EFDEKLLVYDQVKPDVHLESLKPEPIYRGHPDKPMVSFIINVAWGNEYLEEMLPVLQQHRIKATFFLEGRWVKHHPELAK
AIQNGGHEIGNHSYNHPDMSKLTRERISEQLRMTNEQIQETLGVKPKWFAPPSGSFRKEVVDQAHKMGMGTIMWTVDTID
WQKPQPAVLQQRVLSKVHNGAMILMHPTDPTAKSLAVLIQNLHEKGYQIGTVSQLMNEKRLVEE

Sequences:

>Translated_304_residues
MSYQMMNRPYSQHYIDAMKKDAVTVAAQKDDLYQELLQKAPEYEVKAQNAKIDHIWKAMPGYNGLKVNIEKSYKKMKQAG
EFDEKLLVYDQVKPDVHLESLKPEPIYRGHPDKPMVSFIINVAWGNEYLEEMLPVLQQHRIKATFFLEGRWVKHHPELAK
AIQNGGHEIGNHSYNHPDMSKLTRERISEQLRMTNEQIQETLGVKPKWFAPPSGSFRKEVVDQAHKMGMGTIMWTVDTID
WQKPQPAVLQQRVLSKVHNGAMILMHPTDPTAKSLAVLIQNLHEKGYQIGTVSQLMNEKRLVEE
>Mature_303_residues
SYQMMNRPYSQHYIDAMKKDAVTVAAQKDDLYQELLQKAPEYEVKAQNAKIDHIWKAMPGYNGLKVNIEKSYKKMKQAGE
FDEKLLVYDQVKPDVHLESLKPEPIYRGHPDKPMVSFIINVAWGNEYLEEMLPVLQQHRIKATFFLEGRWVKHHPELAKA
IQNGGHEIGNHSYNHPDMSKLTRERISEQLRMTNEQIQETLGVKPKWFAPPSGSFRKEVVDQAHKMGMGTIMWTVDTIDW
QKPQPAVLQQRVLSKVHNGAMILMHPTDPTAKSLAVLIQNLHEKGYQIGTVSQLMNEKRLVEE

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=177, Percent_Identity=27.1186440677966, Blast_Score=73, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6323338, Length=108, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 35135; Mature: 35004

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYQMMNRPYSQHYIDAMKKDAVTVAAQKDDLYQELLQKAPEYEVKAQNAKIDHIWKAMP
CCCCCCCCCHHHHHHHHHHHHHEEEEECHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCC
GYNGLKVNIEKSYKKMKQAGEFDEKLLVYDQVKPDVHLESLKPEPIYRGHPDKPMVSFII
CCCCEEEEHHHHHHHHHHHCCCCHHEEEEECCCCCCCHHCCCCCCCCCCCCCCHHHHHHH
NVAWGNEYLEEMLPVLQQHRIKATFFLEGRWVKHHPELAKAIQNGGHEIGNHSYNHPDMS
HHHCCHHHHHHHHHHHHHHCCEEEEEEECCHHHCCHHHHHHHHCCCCCCCCCCCCCCCHH
KLTRERISEQLRMTNEQIQETLGVKPKWFAPPSGSFRKEVVDQAHKMGMGTIMWTVDTID
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC
WQKPQPAVLQQRVLSKVHNGAMILMHPTDPTAKSLAVLIQNLHEKGYQIGTVSQLMNEKR
CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LVEE
HCCC
>Mature Secondary Structure 
SYQMMNRPYSQHYIDAMKKDAVTVAAQKDDLYQELLQKAPEYEVKAQNAKIDHIWKAMP
CCCCCCCCHHHHHHHHHHHHHEEEEECHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCC
GYNGLKVNIEKSYKKMKQAGEFDEKLLVYDQVKPDVHLESLKPEPIYRGHPDKPMVSFII
CCCCEEEEHHHHHHHHHHHCCCCHHEEEEECCCCCCCHHCCCCCCCCCCCCCCHHHHHHH
NVAWGNEYLEEMLPVLQQHRIKATFFLEGRWVKHHPELAKAIQNGGHEIGNHSYNHPDMS
HHHCCHHHHHHHHHHHHHHCCEEEEEEECCHHHCCHHHHHHHHCCCCCCCCCCCCCCCHH
KLTRERISEQLRMTNEQIQETLGVKPKWFAPPSGSFRKEVVDQAHKMGMGTIMWTVDTID
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC
WQKPQPAVLQQRVLSKVHNGAMILMHPTDPTAKSLAVLIQNLHEKGYQIGTVSQLMNEKR
CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LVEE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]