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The map label for this gene is flhF [H]

Identifier: 52785620

GI number: 52785620

Start: 1814934

End: 1816046

Strand: Direct

Name: flhF [H]

Synonym: BLi01861

Alternate gene names: 52785620

Gene position: 1814934-1816046 (Clockwise)

Preceding gene: 52785619

Following gene: 52785621

Centisome position: 42.98

GC content: 49.33

Gene sequence:

>1113_bases
ATGAAAATCAAAAAATTTGTAGCTGGTTCTATGCAGGAAGCCACAAAGCAAATTATACAGGAGCTCGGGAATGACGCCGT
AATCTTGAATTCTAAAAAAATTCAAAAGAGAAAATTTCTCGGCTTTGTGAAAAAAACCGGGGTTGAAGTGATCGCGGTCG
TCGACCAGGACTTTTCCGACGCAAGGAAGCAAGAGCGTCAAAAGCCCGTTTTCCGGGAACAAAGCCCTTCGCCTGTCCCG
CAGCCGGACCATCTTGATTTGGCAAGCCAAGTGAAAGAGCTGAAAGAACTGCTGGAAATGCGGCATCATGAGCAGCCTGT
TGATGTGCTGCCTGAACCGCTGAAAAAGGCGGACCAGCTCCTGGCAAAGAAAGGGGTATCGCCGGCCATCCGTACGAAAG
CGCTCGGCCGGTTGATCAGCACTTCTTTAAGAGACGGCGAAGAGTGGACGGATGAAAAGACGCTGGCGCACTTAACAGAT
GCTTTGGCCGATCTTCTTCCCGATAATCTGGAACAGGACGTGGCGATTCATTCGCAATATGTCGTGCTCTTCGGATCGAC
CGGAGTCGGCAAAACGACGACATTGGCAAAGCTCGCCGCTTCTTCTGTACTGGAAAAGCAGAAAAAAATCGCTTTTATCA
CGACCGATACGTACAGGATTGCAGCGGTTGAACAGCTCAGGACATATGCCGAGCTTCTGAATGCGCCGCTTGAGGTGTGC
TACACGAAAGAAGAGTTTAAAGCTGCCCAGCAAAAGTTCGCCGATTTTGACCACGTCTTCATTGATACGGCGGGCCGGAA
TTTCAAAGACGGGCAATATGTCAGGGAGCTGAAGGAAATCATTCCGTTTGAGCGTAAGATACAGGCGTTTCTCGTCATGT
CCGCGACGAGCAAGTACGAGGATATGAAGGAGCTCATTAAGCAGTTCTCAAGCATTCCGATCGATCAGTTGATATTCACG
AAAGTGGATGAGACCGATTCGTTGGGAAGCGTCATGAATCTGCTCGCCGAATCGAGAATCGGCCTCGGCTATATTACAAA
CGGACAAAATGTTCCGGAGGATATCCGCTACTTGTCAAACGCAGCATTTGTCAGACTGCTTACGGGGTGTTGA

Upstream 100 bases:

>100_bases
AGCAGCTGCTTGAGCGCTATTTCCCTGATCTGCCGGTTCTTTCCTATAACGAATTGGAAGCCAATGTAGAAGTTCAAAGC
ATCGGAGTGGTGGATATTCA

Downstream 100 bases:

>100_bases
ACATGGATCAGGCAGAAAGCCTACGAAGGCGGATGGGGCAGCGCTTTGCCGAACCGCCCGCCGCTATCGCTCATCCAAAA
GCGAAAACGCTCGCTGTCAT

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MKIKKFVAGSMQEATKQIIQELGNDAVILNSKKIQKRKFLGFVKKTGVEVIAVVDQDFSDARKQERQKPVFREQSPSPVP
QPDHLDLASQVKELKELLEMRHHEQPVDVLPEPLKKADQLLAKKGVSPAIRTKALGRLISTSLRDGEEWTDEKTLAHLTD
ALADLLPDNLEQDVAIHSQYVVLFGSTGVGKTTTLAKLAASSVLEKQKKIAFITTDTYRIAAVEQLRTYAELLNAPLEVC
YTKEEFKAAQQKFADFDHVFIDTAGRNFKDGQYVRELKEIIPFERKIQAFLVMSATSKYEDMKELIKQFSSIPIDQLIFT
KVDETDSLGSVMNLLAESRIGLGYITNGQNVPEDIRYLSNAAFVRLLTGC

Sequences:

>Translated_370_residues
MKIKKFVAGSMQEATKQIIQELGNDAVILNSKKIQKRKFLGFVKKTGVEVIAVVDQDFSDARKQERQKPVFREQSPSPVP
QPDHLDLASQVKELKELLEMRHHEQPVDVLPEPLKKADQLLAKKGVSPAIRTKALGRLISTSLRDGEEWTDEKTLAHLTD
ALADLLPDNLEQDVAIHSQYVVLFGSTGVGKTTTLAKLAASSVLEKQKKIAFITTDTYRIAAVEQLRTYAELLNAPLEVC
YTKEEFKAAQQKFADFDHVFIDTAGRNFKDGQYVRELKEIIPFERKIQAFLVMSATSKYEDMKELIKQFSSIPIDQLIFT
KVDETDSLGSVMNLLAESRIGLGYITNGQNVPEDIRYLSNAAFVRLLTGC
>Mature_370_residues
MKIKKFVAGSMQEATKQIIQELGNDAVILNSKKIQKRKFLGFVKKTGVEVIAVVDQDFSDARKQERQKPVFREQSPSPVP
QPDHLDLASQVKELKELLEMRHHEQPVDVLPEPLKKADQLLAKKGVSPAIRTKALGRLISTSLRDGEEWTDEKTLAHLTD
ALADLLPDNLEQDVAIHSQYVVLFGSTGVGKTTTLAKLAASSVLEKQKKIAFITTDTYRIAAVEQLRTYAELLNAPLEVC
YTKEEFKAAQQKFADFDHVFIDTAGRNFKDGQYVRELKEIIPFERKIQAFLVMSATSKYEDMKELIKQFSSIPIDQLIFT
KVDETDSLGSVMNLLAESRIGLGYITNGQNVPEDIRYLSNAAFVRLLTGC

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1788963, Length=217, Percent_Identity=27.1889400921659, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789874, Length=200, Percent_Identity=28.5, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193206261, Length=213, Percent_Identity=29.1079812206573, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 41556; Mature: 41556

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKKFVAGSMQEATKQIIQELGNDAVILNSKKIQKRKFLGFVKKTGVEVIAVVDQDFSD
CCCHHHHHCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCHHH
ARKQERQKPVFREQSPSPVPQPDHLDLASQVKELKELLEMRHHEQPVDVLPEPLKKADQL
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHH
LAKKGVSPAIRTKALGRLISTSLRDGEEWTDEKTLAHLTDALADLLPDNLEQDVAIHSQY
HHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCEE
VVLFGSTGVGKTTTLAKLAASSVLEKQKKIAFITTDTYRIAAVEQLRTYAELLNAPLEVC
EEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHH
YTKEEFKAAQQKFADFDHVFIDTAGRNFKDGQYVRELKEIIPFERKIQAFLVMSATSKYE
CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DMKELIKQFSSIPIDQLIFTKVDETDSLGSVMNLLAESRIGLGYITNGQNVPEDIRYLSN
HHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
AAFVRLLTGC
HHHHHHHHCC
>Mature Secondary Structure
MKIKKFVAGSMQEATKQIIQELGNDAVILNSKKIQKRKFLGFVKKTGVEVIAVVDQDFSD
CCCHHHHHCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCHHH
ARKQERQKPVFREQSPSPVPQPDHLDLASQVKELKELLEMRHHEQPVDVLPEPLKKADQL
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHH
LAKKGVSPAIRTKALGRLISTSLRDGEEWTDEKTLAHLTDALADLLPDNLEQDVAIHSQY
HHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCEE
VVLFGSTGVGKTTTLAKLAASSVLEKQKKIAFITTDTYRIAAVEQLRTYAELLNAPLEVC
EEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHH
YTKEEFKAAQQKFADFDHVFIDTAGRNFKDGQYVRELKEIIPFERKIQAFLVMSATSKYE
CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DMKELIKQFSSIPIDQLIFTKVDETDSLGSVMNLLAESRIGLGYITNGQNVPEDIRYLSN
HHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
AAFVRLLTGC
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1447978; 9384377 [H]