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The map label for this gene is fliP [H]

Identifier: 52785615

GI number: 52785615

Start: 1810054

End: 1810719

Strand: Direct

Name: fliP [H]

Synonym: BLi01856

Alternate gene names: 52785615

Gene position: 1810054-1810719 (Clockwise)

Preceding gene: 52785614

Following gene: 52785616

Centisome position: 42.87

GC content: 42.19

Gene sequence:

>666_bases
ATGAATGAGTTTATGGATTTATTTAATTCAAGCGATGCGGCAAATGTCAGCGCCAGCGTCCGGCTCTTGCTGCTTTTGAC
AGTATTTTCGATCGCTCCGGGTATCTTGATCTTGATGACTTGTTTCACAAGGGTTGTCATCGTCCTGTCCTTTGTCCGGA
CATCGCTGGCAACACAGTCAATGCCCCCAAACCAGGTGCTGATCGGACTTGCACTGTTCCTGACATTTTTCATTATGGGG
CCGACTTTTTCAGAGATTAATAAAGAAGCGCTGACGCCTTTAATGAACAATAAAATCACCTTGGATGAAGCTTATACAAA
AGCGGAAGCCCCGATCAAAACATTTATGAGCAAGCATACAAGACAGAAAGATCTGGCTTTATTTATGAATTACGCAAAGA
TGGAAACGCCTGAGTCCATCAATGATATTCCGCTTTCAACTATGGTTCCTGCGTTTGTCATCTCGGAATTGAAAACCGCG
TTTCAAATGGGATTTATGATATTTATACCGTTTCTGATTATCGATATGGTTGTGGCAAGTGTTTTGATGTCGATGGGGAT
GATGATGCTTCCGCCGGTCATGATTTCACTGCCGTTTAAGATTTTGCTGTTTGTGCTTGTAGATGGCTGGTATTTAATCG
TTAAATCTTTGCTGCAAAGCTTTTAG

Upstream 100 bases:

>100_bases
AAACAAAGCGGCACGGCATCTTTTTCCGAGTCGTTAAAAGCACAGCTTGCGGAACTGAAACAAAATCGCGCAGAAGGCAG
AAAGAAAGGCCAAAATCAAC

Downstream 100 bases:

>100_bases
AGTAGGTGCTAATACATGAATTCAGAATTTGTTATATCGATGGCTGAAAGGGCTGTATACGTTACATTGCTTATCAGCGG
GCCGCTTTTGGCGCTCGCTC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNEFMDLFNSSDAANVSASVRLLLLLTVFSIAPGILILMTCFTRVVIVLSFVRTSLATQSMPPNQVLIGLALFLTFFIMG
PTFSEINKEALTPLMNNKITLDEAYTKAEAPIKTFMSKHTRQKDLALFMNYAKMETPESINDIPLSTMVPAFVISELKTA
FQMGFMIFIPFLIIDMVVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWYLIVKSLLQSF

Sequences:

>Translated_221_residues
MNEFMDLFNSSDAANVSASVRLLLLLTVFSIAPGILILMTCFTRVVIVLSFVRTSLATQSMPPNQVLIGLALFLTFFIMG
PTFSEINKEALTPLMNNKITLDEAYTKAEAPIKTFMSKHTRQKDLALFMNYAKMETPESINDIPLSTMVPAFVISELKTA
FQMGFMIFIPFLIIDMVVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWYLIVKSLLQSF
>Mature_221_residues
MNEFMDLFNSSDAANVSASVRLLLLLTVFSIAPGILILMTCFTRVVIVLSFVRTSLATQSMPPNQVLIGLALFLTFFIMG
PTFSEINKEALTPLMNNKITLDEAYTKAEAPIKTFMSKHTRQKDLALFMNYAKMETPESINDIPLSTMVPAFVISELKTA
FQMGFMIFIPFLIIDMVVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWYLIVKSLLQSF

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=211, Percent_Identity=51.6587677725119, Blast_Score=222, Evalue=2e-59,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 24734; Mature: 24734

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
8.6 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
8.6 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFMDLFNSSDAANVSASVRLLLLLTVFSIAPGILILMTCFTRVVIVLSFVRTSLATQS
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPPNQVLIGLALFLTFFIMGPTFSEINKEALTPLMNNKITLDEAYTKAEAPIKTFMSKHT
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHH
RQKDLALFMNYAKMETPESINDIPLSTMVPAFVISELKTAFQMGFMIFIPFLIIDMVVAS
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLMSMGMMMLPPVMISLPFKILLFVLVDGWYLIVKSLLQSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNEFMDLFNSSDAANVSASVRLLLLLTVFSIAPGILILMTCFTRVVIVLSFVRTSLATQS
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPPNQVLIGLALFLTFFIMGPTFSEINKEALTPLMNNKITLDEAYTKAEAPIKTFMSKHT
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHH
RQKDLALFMNYAKMETPESINDIPLSTMVPAFVISELKTAFQMGFMIFIPFLIIDMVVAS
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLMSMGMMMLPPVMISLPFKILLFVLVDGWYLIVKSLLQSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]