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The map label for this gene is flgC [H]

Identifier: 52785598

GI number: 52785598

Start: 1796875

End: 1797327

Strand: Direct

Name: flgC [H]

Synonym: BLi01839

Alternate gene names: 52785598

Gene position: 1796875-1797327 (Clockwise)

Preceding gene: 52785597

Following gene: 52785599

Centisome position: 42.55

GC content: 47.9

Gene sequence:

>453_bases
ATGGGGGTATTCAATAGCATCAACATTTCAGCTTCAGCGTTGACTGCACAGAGAGTCAGAATGGATACCGTTTCTTCCAA
CCTGGCAAACATGGATACGACGAGAGCGAAGCTGGTTGACGGACAGTGGCAGCCGTATAGAAGAAAGCTTGTATCGACGG
CTCCGAAAGGCGAATCCTTTTCATCCGTTCTCCAATCATCGATGAATGCATCGGCGAGAGTCGGCGAAGGGGTGAAGGTG
ACCAAGATAAGCGAAGACAAAACACCGTTTAAGCTCGTTTATGATCCGACCCATCCCGACGCAAACGAAGACGGATACGT
GCAGATGCCGAATGTCGATCCGCTAAAAGAGATGGTCGATTTAATGAGCAGCACAAGGTCATATGAAGCCAATGTCACAG
CAATGAACGCGACAAAAGGAATGCTGATGAAAGCATTAGAAATCGGAAAGTAG

Upstream 100 bases:

>100_bases
TGAGTGAAATGGCGAAAAATCAAATCCAGTATCAAGCGCTGGTTGAAAGAATAAGCGGAAAATTCAACTCGCTAAGAACC
GCGATTACAGGAGGTAAATA

Downstream 100 bases:

>100_bases
GGTGATGACACGAATGGTTAATGGAATCTCTCCGTTTGGAGTTCAATCCGTGCAGGCGGGAACGAATGCAACAAATCAGA
TCAAGAACAAGCAGGACGGT

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MGVFNSINISASALTAQRVRMDTVSSNLANMDTTRAKLVDGQWQPYRRKLVSTAPKGESFSSVLQSSMNASARVGEGVKV
TKISEDKTPFKLVYDPTHPDANEDGYVQMPNVDPLKEMVDLMSSTRSYEANVTAMNATKGMLMKALEIGK

Sequences:

>Translated_150_residues
MGVFNSINISASALTAQRVRMDTVSSNLANMDTTRAKLVDGQWQPYRRKLVSTAPKGESFSSVLQSSMNASARVGEGVKV
TKISEDKTPFKLVYDPTHPDANEDGYVQMPNVDPLKEMVDLMSSTRSYEANVTAMNATKGMLMKALEIGK
>Mature_149_residues
GVFNSINISASALTAQRVRMDTVSSNLANMDTTRAKLVDGQWQPYRRKLVSTAPKGESFSSVLQSSMNASARVGEGVKVT
KISEDKTPFKLVYDPTHPDANEDGYVQMPNVDPLKEMVDLMSSTRSYEANVTAMNATKGMLMKALEIGK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=150, Percent_Identity=44, Blast_Score=113, Evalue=4e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 16396; Mature: 16265

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVFNSINISASALTAQRVRMDTVSSNLANMDTTRAKLVDGQWQPYRRKLVSTAPKGESF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHCCCCCCHH
SSVLQSSMNASARVGEGVKVTKISEDKTPFKLVYDPTHPDANEDGYVQMPNVDPLKEMVD
HHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHH
LMSSTRSYEANVTAMNATKGMLMKALEIGK
HHHCCCCCCCEEEEECCHHHHHHHHHHCCC
>Mature Secondary Structure 
GVFNSINISASALTAQRVRMDTVSSNLANMDTTRAKLVDGQWQPYRRKLVSTAPKGESF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHCCCCCCHH
SSVLQSSMNASARVGEGVKVTKISEDKTPFKLVYDPTHPDANEDGYVQMPNVDPLKEMVD
HHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHH
LMSSTRSYEANVTAMNATKGMLMKALEIGK
HHHCCCCCCCEEEEECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]