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The map label for this gene is sdaAA [H]

Identifier: 52785566

GI number: 52785566

Start: 1764720

End: 1765622

Strand: Direct

Name: sdaAA [H]

Synonym: BLi01807

Alternate gene names: 52785566

Gene position: 1764720-1765622 (Clockwise)

Preceding gene: 52785565

Following gene: 52785567

Centisome position: 41.79

GC content: 55.26

Gene sequence:

>903_bases
ATGTTTCGAAATGTGAAAGAATTAATTCAACTGACAAAGGAAAAGAACGTGTCCATCTCTGAAATCATGATCACACAGGA
GATCGAGGTGACAGGCCGGACGCGGGAAGATATATTCAAGCAGATGGAAGCCAACTTGGCTGTCATGGAAGACGCTGTTC
AAAAAGGCATTGAGGGCGTCGTATCGCACTCCGGATTGACGGGCGGAGACGCCGTTAAGCTTCAGGCCTACCTTAAATCG
GGCAAAGGGCTGTCAGGGGATGTCATCCTTGACGCTGTCAGCAAAGCGGTAGCGACAAATGAAGTCAACGCTGCGATGGG
AACGATTTGCGCAACGCCGACAGCCGGATCGGCCGGCGTTGTCCCGGGGACGCTCTTTGCGGTAAAAGAGAAACTTCACC
CGACGAAAGAGCAGATGGTCCGCTTTTTATTTACATCGGGAGCGTTCGGATTCGTCGTTGCCAACAATGCGAGCATTTCG
GGAGCCGCCGGAGGCTGTCAGGCTGAAGTCGGATCGGCCTCGGGCATGGCGGCTGCCGCCATCGTCGAAATGGCGGGCGG
AACCCCTGAACAGTGCGCCGAAGCGATGGCCATCGCTTTAAAAAACGTACTCGGTCTAGTCTGCGATCCTGTCGCAGGGC
TCGTTGAGGTGCCGTGTGTGAAGCGGAACGCGATGGGCGCAGCCAATGCGATGGTCGCGGCTGATATGGCGCTTGCCGGC
ATTACAAGCCGCATTCCATGCGATGAAGTGATCGATGCGATGTACAAAATCGGACAGACGATGCCGACGGCACTGAGGGA
AACAGGCCGGGGCGGTCTTGCCGCAACACCGACGGGCAAAGAATTGGAGAAAAAAATATTCGGAGGAGCGTCAGCTGCAC
GTGGAACACAATCTGCAACTTAG

Upstream 100 bases:

>100_bases
CGATCAAACGATTGATCCGGCTGTTTTTGATGAATTGAGAGCGCTGCCGAACATCATTGAGGTGACCCAGATCGCTGACT
AAAAAGGAGGGTGAGACGAT

Downstream 100 bases:

>100_bases
TATATCTGTTATAAAAGGCGTCGGGACGGAAACGGAAAAAACGTTGAACGAGCTCGGAATCTATACGGTTCTCGATCTTT
TAAACTACTTCCCGTACCGA

Product: SdaAA

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MFRNVKELIQLTKEKNVSISEIMITQEIEVTGRTREDIFKQMEANLAVMEDAVQKGIEGVVSHSGLTGGDAVKLQAYLKS
GKGLSGDVILDAVSKAVATNEVNAAMGTICATPTAGSAGVVPGTLFAVKEKLHPTKEQMVRFLFTSGAFGFVVANNASIS
GAAGGCQAEVGSASGMAAAAIVEMAGGTPEQCAEAMAIALKNVLGLVCDPVAGLVEVPCVKRNAMGAANAMVAADMALAG
ITSRIPCDEVIDAMYKIGQTMPTALRETGRGGLAATPTGKELEKKIFGGASAARGTQSAT

Sequences:

>Translated_300_residues
MFRNVKELIQLTKEKNVSISEIMITQEIEVTGRTREDIFKQMEANLAVMEDAVQKGIEGVVSHSGLTGGDAVKLQAYLKS
GKGLSGDVILDAVSKAVATNEVNAAMGTICATPTAGSAGVVPGTLFAVKEKLHPTKEQMVRFLFTSGAFGFVVANNASIS
GAAGGCQAEVGSASGMAAAAIVEMAGGTPEQCAEAMAIALKNVLGLVCDPVAGLVEVPCVKRNAMGAANAMVAADMALAG
ITSRIPCDEVIDAMYKIGQTMPTALRETGRGGLAATPTGKELEKKIFGGASAARGTQSAT
>Mature_300_residues
MFRNVKELIQLTKEKNVSISEIMITQEIEVTGRTREDIFKQMEANLAVMEDAVQKGIEGVVSHSGLTGGDAVKLQAYLKS
GKGLSGDVILDAVSKAVATNEVNAAMGTICATPTAGSAGVVPGTLFAVKEKLHPTKEQMVRFLFTSGAFGFVVANNASIS
GAAGGCQAEVGSASGMAAAAIVEMAGGTPEQCAEAMAIALKNVLGLVCDPVAGLVEVPCVKRNAMGAANAMVAADMALAG
ITSRIPCDEVIDAMYKIGQTMPTALRETGRGGLAATPTGKELEKKIFGGASAARGTQSAT

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-sulfur dependent L-serine dehydratase family [H]

Homologues:

Organism=Escherichia coli, GI48994925, Length=280, Percent_Identity=37.8571428571429, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1788116, Length=280, Percent_Identity=37.5, Blast_Score=164, Evalue=9e-42,
Organism=Escherichia coli, GI1789161, Length=280, Percent_Identity=36.4285714285714, Blast_Score=159, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR004642 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 30655; Mature: 30655

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNVKELIQLTKEKNVSISEIMITQEIEVTGRTREDIFKQMEANLAVMEDAVQKGIEGV
CCCCHHHHHHHHHHCCCCHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSHSGLTGGDAVKLQAYLKSGKGLSGDVILDAVSKAVATNEVNAAMGTICATPTAGSAGV
HHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VPGTLFAVKEKLHPTKEQMVRFLFTSGAFGFVVANNASISGAAGGCQAEVGSASGMAAAA
CCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
IVEMAGGTPEQCAEAMAIALKNVLGLVCDPVAGLVEVPCVKRNAMGAANAMVAADMALAG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHH
ITSRIPCDEVIDAMYKIGQTMPTALRETGRGGLAATPTGKELEKKIFGGASAARGTQSAT
HHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFRNVKELIQLTKEKNVSISEIMITQEIEVTGRTREDIFKQMEANLAVMEDAVQKGIEGV
CCCCHHHHHHHHHHCCCCHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSHSGLTGGDAVKLQAYLKSGKGLSGDVILDAVSKAVATNEVNAAMGTICATPTAGSAGV
HHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VPGTLFAVKEKLHPTKEQMVRFLFTSGAFGFVVANNASISGAAGGCQAEVGSASGMAAAA
CCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
IVEMAGGTPEQCAEAMAIALKNVLGLVCDPVAGLVEVPCVKRNAMGAANAMVAADMALAG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHH
ITSRIPCDEVIDAMYKIGQTMPTALRETGRGGLAATPTGKELEKKIFGGASAARGTQSAT
HHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]