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The map label for this gene is ykrA [H]

Identifier: 52785430

GI number: 52785430

Start: 1629714

End: 1630490

Strand: Direct

Name: ykrA [H]

Synonym: BLi01670

Alternate gene names: 52785430

Gene position: 1629714-1630490 (Clockwise)

Preceding gene: 52785427

Following gene: 52785433

Centisome position: 38.59

GC content: 50.58

Gene sequence:

>777_bases
ATGGATAAAAAGCTGATTTTCTTTGATATTGACGGAACGATTTATGATCACAATAAACGCATTCCCGCCACCGCAAAACA
GGCCGTCTCCGATTTGAAAGCGCACGGCCATCATGTTTTCATCGCGTCAGGCCGTGCGCCGTTTATGGTCAGGCCTGTTC
TTGAAGAACTGGGCATCGATTCTTTTGTCTCTTATAACGGACAATATGTCGTTTTTGAAGGAGAGGTCATTTATAAAAAT
CCCATTGCCGAGCAGTCGTTAGAAGCGCTGCTTGCGCATTCGGACAGCTGCGGCCACCCCCTCGTCTTCATGGGGGAAGA
GGGGATGCGCTCTACAACTGCCGCCCATCCGTTCGTCGATGAAGGGATCGGCAGCTTAAAAGTCAATCCGCCGGAAGAGG
ATCGTACCTACTTTAAGGGCAGGGACATTTTCCAGGTCCTCTTGTTCTGCACGCAAGACGAGGAAGAGCGGTACAGCCGG
TTTAAAGAGTTTGATCTCGTCCGCTGGCACGAGCGCTCCACAGATGTGCTGCCTTCAGGCGGATCGAAAGCGGAAGGAAT
CAAAAAAGTCATTGAAAAACTTCCGTTCGACAGAGAGGATACTTATGCGTTCGGGGACGGTCTGAACGACCTGCAGATGA
TCGAATTTGCGGGAACCGGAGTAGCGATGGGCAACGCTGTGCCCGAGCTGAAAAAAATAGCCGACTTTATCACAAAGCCC
GTCGATGAAGACGGCATTCAATACGCGGTGGAAGCGCTCGGACTTTTGAAATCATAA

Upstream 100 bases:

>100_bases
TTGATTTTGGAGTGAAAAGGTTTTCTCGCGTACGCAGTTTTTGTATGATGGTACAGGAGAACCATCAATCATACTAGCTA
AGGGAGAAGGATTCACTGCC

Downstream 100 bases:

>100_bases
AAAACGGATCAGAAATGATCCGTTTTTTTTATGACTTTACCTGCCTACAGGCGTTGCATTTTCAGGTTGTTTCAGCGGGT
TTTCTTTGTCGATGTGGTCG

Product: YkrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MDKKLIFFDIDGTIYDHNKRIPATAKQAVSDLKAHGHHVFIASGRAPFMVRPVLEELGIDSFVSYNGQYVVFEGEVIYKN
PIAEQSLEALLAHSDSCGHPLVFMGEEGMRSTTAAHPFVDEGIGSLKVNPPEEDRTYFKGRDIFQVLLFCTQDEEERYSR
FKEFDLVRWHERSTDVLPSGGSKAEGIKKVIEKLPFDREDTYAFGDGLNDLQMIEFAGTGVAMGNAVPELKKIADFITKP
VDEDGIQYAVEALGLLKS

Sequences:

>Translated_258_residues
MDKKLIFFDIDGTIYDHNKRIPATAKQAVSDLKAHGHHVFIASGRAPFMVRPVLEELGIDSFVSYNGQYVVFEGEVIYKN
PIAEQSLEALLAHSDSCGHPLVFMGEEGMRSTTAAHPFVDEGIGSLKVNPPEEDRTYFKGRDIFQVLLFCTQDEEERYSR
FKEFDLVRWHERSTDVLPSGGSKAEGIKKVIEKLPFDREDTYAFGDGLNDLQMIEFAGTGVAMGNAVPELKKIADFITKP
VDEDGIQYAVEALGLLKS
>Mature_258_residues
MDKKLIFFDIDGTIYDHNKRIPATAKQAVSDLKAHGHHVFIASGRAPFMVRPVLEELGIDSFVSYNGQYVVFEGEVIYKN
PIAEQSLEALLAHSDSCGHPLVFMGEEGMRSTTAAHPFVDEGIGSLKVNPPEEDRTYFKGRDIFQVLLFCTQDEEERYSR
FKEFDLVRWHERSTDVLPSGGSKAEGIKKVIEKLPFDREDTYAFGDGLNDLQMIEFAGTGVAMGNAVPELKKIADFITKP
VDEDGIQYAVEALGLLKS

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=277, Percent_Identity=28.158844765343, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786982, Length=269, Percent_Identity=26.0223048327138, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28811; Mature: 28811

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKLIFFDIDGTIYDHNKRIPATAKQAVSDLKAHGHHVFIASGRAPFMVRPVLEELGID
CCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHHHCCCC
SFVSYNGQYVVFEGEVIYKNPIAEQSLEALLAHSDSCGHPLVFMGEEGMRSTTAAHPFVD
HHHHCCCEEEEEECEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHH
EGIGSLKVNPPEEDRTYFKGRDIFQVLLFCTQDEEERYSRFKEFDLVRWHERSTDVLPSG
CCCCCEECCCCCHHHCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
GSKAEGIKKVIEKLPFDREDTYAFGDGLNDLQMIEFAGTGVAMGNAVPELKKIADFITKP
CCHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHCC
VDEDGIQYAVEALGLLKS
CCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKKLIFFDIDGTIYDHNKRIPATAKQAVSDLKAHGHHVFIASGRAPFMVRPVLEELGID
CCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHHHCCCC
SFVSYNGQYVVFEGEVIYKNPIAEQSLEALLAHSDSCGHPLVFMGEEGMRSTTAAHPFVD
HHHHCCCEEEEEECEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHH
EGIGSLKVNPPEEDRTYFKGRDIFQVLLFCTQDEEERYSRFKEFDLVRWHERSTDVLPSG
CCCCCEECCCCCHHHCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
GSKAEGIKKVIEKLPFDREDTYAFGDGLNDLQMIEFAGTGVAMGNAVPELKKIADFITKP
CCHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHCC
VDEDGIQYAVEALGLLKS
CCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]