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The map label for this gene is ccpC [H]

Identifier: 52785389

GI number: 52785389

Start: 1591073

End: 1591948

Strand: Direct

Name: ccpC [H]

Synonym: BLi01628

Alternate gene names: 52785389

Gene position: 1591073-1591948 (Clockwise)

Preceding gene: 52785388

Following gene: 52785390

Centisome position: 37.68

GC content: 47.15

Gene sequence:

>876_bases
ATGCAGCTTCAAGAGCTTCACATGCTTGTCGTTCTGGCGGAAGAATTAAATATGCGGAAAGCGGCTGAACGTCTGTTTGT
TTCCCAGCCGGCATTATCCCAGCGGCTGCAGACCATCGAGAAATCATGGGGAACGAAAATTTTTTTAAGATCGCAAAAAG
GGCTGACTGTCACGTCTGCCGGAGAAAAAATTATCCAGTTTGCAAAAGATGTAACATTGGAACAGGAAAAAGTGAGAGAG
AATATAGATGAGCTGGAGGGCGAGATACACGGTACGCTCAAATTGGCGGCCGCTTCGATTATCGGGCAGCATTGGCTTCC
GAACGTTCTGAAAACCTACGTTAAACAATATCCGAACGTCAAAATCTCCCTCGTCACCGGCTGGAGCAGCGAAATGCTGA
AAAGCCTCTACGAAGACCATGTTCATATTGGCATTATCAGGGGAAACCCGGAATGGAAAGGCCCTAAGCACTACTTGATG
CGGGACGAATTGTACCTTGTCGATACAGAGATCCGAAACATTGAGGACATTGCCAAAACGGAACGGCCGTTCATCCAGTT
CAAAAGCGACAGCACGTACTATCAGGAAATTCAGCACTGGTGGCACCAAAAGTTCAAAACATCGCCGAAACAAACCATTA
TTGTCGACCAAATTGAAACATGCAAACAGATGGCTTTCCACGGAATCGGTTATGCGATCCTTCCATCGGTGACGCTTCAC
GGAAGCGGGAGCCATGTTCACCAAATCCCTTTGCTTGATGCTAAAGGAAAAGCAATCGGCAGAGATACGTGGCTGCTCGG
TTATGAGCCGGCTTTCCAGCTGAAGCAAGTACAGGCGTTTGTAGAAGTTGTGAAAGAATGTACGGCAATGGAATAA

Upstream 100 bases:

>100_bases
TCCTCCGCACATTCCCCGATGCCCGACTTCCCGCTTGATTAAAAAACAGCCGTTTGATTAAATGTATGATAAGAAAAACT
TATTGGAATGAGGAATGTCC

Downstream 100 bases:

>100_bases
ACACTAGAAAGGCAGGACTCCAAAAAGGGGACTGCTTTTTTTTGTACGATTTATTGACATTGATAATCATTATCATTTAA
AGTGTATCTATACAATAATG

Product: CcpC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MQLQELHMLVVLAEELNMRKAAERLFVSQPALSQRLQTIEKSWGTKIFLRSQKGLTVTSAGEKIIQFAKDVTLEQEKVRE
NIDELEGEIHGTLKLAAASIIGQHWLPNVLKTYVKQYPNVKISLVTGWSSEMLKSLYEDHVHIGIIRGNPEWKGPKHYLM
RDELYLVDTEIRNIEDIAKTERPFIQFKSDSTYYQEIQHWWHQKFKTSPKQTIIVDQIETCKQMAFHGIGYAILPSVTLH
GSGSHVHQIPLLDAKGKAIGRDTWLLGYEPAFQLKQVQAFVEVVKECTAME

Sequences:

>Translated_291_residues
MQLQELHMLVVLAEELNMRKAAERLFVSQPALSQRLQTIEKSWGTKIFLRSQKGLTVTSAGEKIIQFAKDVTLEQEKVRE
NIDELEGEIHGTLKLAAASIIGQHWLPNVLKTYVKQYPNVKISLVTGWSSEMLKSLYEDHVHIGIIRGNPEWKGPKHYLM
RDELYLVDTEIRNIEDIAKTERPFIQFKSDSTYYQEIQHWWHQKFKTSPKQTIIVDQIETCKQMAFHGIGYAILPSVTLH
GSGSHVHQIPLLDAKGKAIGRDTWLLGYEPAFQLKQVQAFVEVVKECTAME
>Mature_291_residues
MQLQELHMLVVLAEELNMRKAAERLFVSQPALSQRLQTIEKSWGTKIFLRSQKGLTVTSAGEKIIQFAKDVTLEQEKVRE
NIDELEGEIHGTLKLAAASIIGQHWLPNVLKTYVKQYPNVKISLVTGWSSEMLKSLYEDHVHIGIIRGNPEWKGPKHYLM
RDELYLVDTEIRNIEDIAKTERPFIQFKSDSTYYQEIQHWWHQKFKTSPKQTIIVDQIETCKQMAFHGIGYAILPSVTLH
GSGSHVHQIPLLDAKGKAIGRDTWLLGYEPAFQLKQVQAFVEVVKECTAME

Specific function: This Protein Activates The Transcription Of The Ilvc Gene In The Presence Of Acetolactate Or Acetohydroxybutyrate. Ilvy Is Also A Negative Regulator Of Its Own Expression. [C]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790208, Length=258, Percent_Identity=25.968992248062, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787601, Length=155, Percent_Identity=27.741935483871, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1787530, Length=147, Percent_Identity=31.2925170068027, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787879, Length=248, Percent_Identity=22.9838709677419, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI145693105, Length=148, Percent_Identity=24.3243243243243, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788887, Length=244, Percent_Identity=22.9508196721311, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788706, Length=128, Percent_Identity=31.25, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788296, Length=147, Percent_Identity=27.891156462585, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI157672245, Length=145, Percent_Identity=26.2068965517241, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787589, Length=144, Percent_Identity=23.6111111111111, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786401, Length=146, Percent_Identity=28.0821917808219, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790399, Length=137, Percent_Identity=27.7372262773723, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87081904, Length=170, Percent_Identity=27.6470588235294, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33420; Mature: 33420

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLQELHMLVVLAEELNMRKAAERLFVSQPALSQRLQTIEKSWGTKIFLRSQKGLTVTSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEHH
GEKIIQFAKDVTLEQEKVRENIDELEGEIHGTLKLAAASIIGQHWLPNVLKTYVKQYPNV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
KISLVTGWSSEMLKSLYEDHVHIGIIRGNPEWKGPKHYLMRDELYLVDTEIRNIEDIAKT
EEEEEECCHHHHHHHHHHCCEEEEEEECCCCCCCCHHHEECCCEEEEECHHHHHHHHHHC
ERPFIQFKSDSTYYQEIQHWWHQKFKTSPKQTIIVDQIETCKQMAFHGIGYAILPSVTLH
CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCHHHHCCEEEE
GSGSHVHQIPLLDAKGKAIGRDTWLLGYEPAFQLKQVQAFVEVVKECTAME
CCCCCEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLQELHMLVVLAEELNMRKAAERLFVSQPALSQRLQTIEKSWGTKIFLRSQKGLTVTSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEHH
GEKIIQFAKDVTLEQEKVRENIDELEGEIHGTLKLAAASIIGQHWLPNVLKTYVKQYPNV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
KISLVTGWSSEMLKSLYEDHVHIGIIRGNPEWKGPKHYLMRDELYLVDTEIRNIEDIAKT
EEEEEECCHHHHHHHHHHCCEEEEEEECCCCCCCCHHHEECCCEEEEECHHHHHHHHHHC
ERPFIQFKSDSTYYQEIQHWWHQKFKTSPKQTIIVDQIETCKQMAFHGIGYAILPSVTLH
CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCHHHHCCEEEE
GSGSHVHQIPLLDAKGKAIGRDTWLLGYEPAFQLKQVQAFVEVVKECTAME
CCCCCEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]