Click here to switch to the map view.

The map label for this gene is mcpC [H]

Identifier: 52785367

GI number: 52785367

Start: 1568463

End: 1570430

Strand: Direct

Name: mcpC [H]

Synonym: BLi01604

Alternate gene names: 52785367

Gene position: 1568463-1570430 (Clockwise)

Preceding gene: 52785365

Following gene: 52785368

Centisome position: 37.14

GC content: 44.05

Gene sequence:

>1968_bases
TTGTTTAAAAAACTGCATGTCAAAATTGCCGGATTTGTTGCCGTCCTGCTGGTTTTGACGGTTATCGTCCTACAGTTCTC
GACAACACATTTGTTGAAATCGATGCTTGAAGATGAGGCAAAAGAATCAACGTCCAGCCTCCTCGGTTCAATTAAAAGAA
ATATTGAGCTTCAATTAGAACACTACGAGATTTCTTTGAATCGTATAAGTGATGGAGAAATGGCTCACTCATTCTTAAAA
GACGGGGATAATAAAATTATAAAAATCGTCAATGATGAATTAAAACAATTAAAAGAAAAAAATGAGTATGTCAATTTAGC
TTATATCGGCACAAAAAAGAAGGAAATGTTTACATTTCCGAAAACGACCTTTGATGATGATTATAATCCGGCTGAAAGGC
CATGGTATACGTCAGCTGCAAAAACACCCGACAAAGTCGTTTGGACGGAACCTTACAAAGATGCGGTTTCCGGAGATATG
ACAGTTACTGCGGCAAAAGCCATCGTCGTCAATAATAAAGTTGAAGGCGTTGTCAGTATAGACTTGTCATTGAATTCATT
GAACAAAATTATCGAAAATCAAAAGATGCCTTATGACGGCTACGCATTTATTTTGGACCAAAACGGGACAATGCTCGCCC
ACCCGTCAAAACAGGGCGACGATATATCGAATGATAAAACATATCGGGACATCCCGTCATCAAAAGACGGAATCAAAGTA
GGCAAAGATACTGTGATCGCTTATCAGACTGTCGGCGGTACGGGCTGGAAAGTCGGTACGCAGTTCGACACGGCGAAGCT
GATGTGGGTCGCGCAGGAAATGAACAAAATGGTCATTATCGTTTCAATCATTGCTCTGGCAGCGGCGATCATTTTAAGCT
ATTTCGTTGCCAAAACGATCACAGGCCCGATTAAGCAGCTGATTGCCAAAACAAAAGCAGTCGCTGGCGGCGATTTGACG
GTCCAAACAGCAGCTGCCTCAAAAGATGAAATCGGTATATTGACAAAAGACTTTAACAAGATGGTCGAACATATGAAAGA
AATGATTGTGCAAGTCAGATCATCGTCCGGAAAAGTATCGGATACGACCGATCAATTAAGCGCTGTTTCAGAAGAGACGG
TTTCTGCGAGCGATGAAATCGCCAAAGCAATCGAAGAAGTGGCGACAGGCGCGACTGAACAGGCGGCTGAGGTCGAAAAT
GTCAATGAACAATCCGAACGGCTGTCTGTCAAAATTAAAGAAATCGAACATCATGCCGACAGCATCAAGAAACTTTCGAG
AACATCAGAAGAAGCAAGCTATACAGGAATCGATGCCCTCGGGCAGCTGCTTGCAAAGTCAAATGAAGCAAACTCGGAGA
CAAAGAAAGTGGAACATATGCTATTCCAGCTTGAAGAAAAAACGAAAAACATTGAAGACGTTGTTACAGCCATCTCGGCG
ATCTCTGATCAGACAAACCTGCTTGCTCTGAACGCCAGCATTGAAGCGGCCCGTGCCGGAGAAAGCGGACGCGGTTTTGC
GGTAGTTGCAGAAGAGGTGAGAAAGCTTGCTGAACAATCGGCGGTTTCTTCACAGCACATCAGTGAAACGGTCAAACAGA
TTCAGATGGAAACGAAAGAAGCCGTTTCAGCGATGACAGAAGCAAGCAAGATGAATGAAGTGCAAAATGGAATGATTCAC
GAAACAGGTGAAGCGCTCAGCAAAATTACTGCTGAAATGCAGGCGCTCGTCAACTCAATTGACCACATTTATTCTGAAAT
CTCGGATATGAGCGGAGAGCAGCAAAAAATGTCCGATTCGATTCAGAGCATTTCAGCCATTTCCCAGCAGTCTGCCGCGG
CTGCGGAAGAGGTCAGCGCTTCGGCCAACGAGCAGCTGACAGCGCTGGAAAGCATCGCAAAATCGGCTGAAGCGCTGAGC
GAGGCCAACCAAGAATTATTAAATGCGATCAATAAGTTTAACGTGTAA

Upstream 100 bases:

>100_bases
TATTTCCTCCATTATACCGTTATTTTAACAGGCTATCTTAATTTTGCGAAATTTTTGCCGATAAAAAGAATATGAAGGTG
CATGTAAAGGAGGGTTTCAT

Downstream 100 bases:

>100_bases
TAAAGAGGTCCCTCTTGTTGAAAGAGGGACTTCTCCTTTTTCAACATTCACAATCCCAATTTTCAGAATATACGTGTTAC
ACTATAAGAAGGAAGGGAGT

Product: McpC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 655; Mature: 655

Protein sequence:

>655_residues
MFKKLHVKIAGFVAVLLVLTVIVLQFSTTHLLKSMLEDEAKESTSSLLGSIKRNIELQLEHYEISLNRISDGEMAHSFLK
DGDNKIIKIVNDELKQLKEKNEYVNLAYIGTKKKEMFTFPKTTFDDDYNPAERPWYTSAAKTPDKVVWTEPYKDAVSGDM
TVTAAKAIVVNNKVEGVVSIDLSLNSLNKIIENQKMPYDGYAFILDQNGTMLAHPSKQGDDISNDKTYRDIPSSKDGIKV
GKDTVIAYQTVGGTGWKVGTQFDTAKLMWVAQEMNKMVIIVSIIALAAAIILSYFVAKTITGPIKQLIAKTKAVAGGDLT
VQTAAASKDEIGILTKDFNKMVEHMKEMIVQVRSSSGKVSDTTDQLSAVSEETVSASDEIAKAIEEVATGATEQAAEVEN
VNEQSERLSVKIKEIEHHADSIKKLSRTSEEASYTGIDALGQLLAKSNEANSETKKVEHMLFQLEEKTKNIEDVVTAISA
ISDQTNLLALNASIEAARAGESGRGFAVVAEEVRKLAEQSAVSSQHISETVKQIQMETKEAVSAMTEASKMNEVQNGMIH
ETGEALSKITAEMQALVNSIDHIYSEISDMSGEQQKMSDSIQSISAISQQSAAAAEEVSASANEQLTALESIAKSAEALS
EANQELLNAINKFNV

Sequences:

>Translated_655_residues
MFKKLHVKIAGFVAVLLVLTVIVLQFSTTHLLKSMLEDEAKESTSSLLGSIKRNIELQLEHYEISLNRISDGEMAHSFLK
DGDNKIIKIVNDELKQLKEKNEYVNLAYIGTKKKEMFTFPKTTFDDDYNPAERPWYTSAAKTPDKVVWTEPYKDAVSGDM
TVTAAKAIVVNNKVEGVVSIDLSLNSLNKIIENQKMPYDGYAFILDQNGTMLAHPSKQGDDISNDKTYRDIPSSKDGIKV
GKDTVIAYQTVGGTGWKVGTQFDTAKLMWVAQEMNKMVIIVSIIALAAAIILSYFVAKTITGPIKQLIAKTKAVAGGDLT
VQTAAASKDEIGILTKDFNKMVEHMKEMIVQVRSSSGKVSDTTDQLSAVSEETVSASDEIAKAIEEVATGATEQAAEVEN
VNEQSERLSVKIKEIEHHADSIKKLSRTSEEASYTGIDALGQLLAKSNEANSETKKVEHMLFQLEEKTKNIEDVVTAISA
ISDQTNLLALNASIEAARAGESGRGFAVVAEEVRKLAEQSAVSSQHISETVKQIQMETKEAVSAMTEASKMNEVQNGMIH
ETGEALSKITAEMQALVNSIDHIYSEISDMSGEQQKMSDSIQSISAISQQSAAAAEEVSASANEQLTALESIAKSAEALS
EANQELLNAINKFNV
>Mature_655_residues
MFKKLHVKIAGFVAVLLVLTVIVLQFSTTHLLKSMLEDEAKESTSSLLGSIKRNIELQLEHYEISLNRISDGEMAHSFLK
DGDNKIIKIVNDELKQLKEKNEYVNLAYIGTKKKEMFTFPKTTFDDDYNPAERPWYTSAAKTPDKVVWTEPYKDAVSGDM
TVTAAKAIVVNNKVEGVVSIDLSLNSLNKIIENQKMPYDGYAFILDQNGTMLAHPSKQGDDISNDKTYRDIPSSKDGIKV
GKDTVIAYQTVGGTGWKVGTQFDTAKLMWVAQEMNKMVIIVSIIALAAAIILSYFVAKTITGPIKQLIAKTKAVAGGDLT
VQTAAASKDEIGILTKDFNKMVEHMKEMIVQVRSSSGKVSDTTDQLSAVSEETVSASDEIAKAIEEVATGATEQAAEVEN
VNEQSERLSVKIKEIEHHADSIKKLSRTSEEASYTGIDALGQLLAKSNEANSETKKVEHMLFQLEEKTKNIEDVVTAISA
ISDQTNLLALNASIEAARAGESGRGFAVVAEEVRKLAEQSAVSSQHISETVKQIQMETKEAVSAMTEASKMNEVQNGMIH
ETGEALSKITAEMQALVNSIDHIYSEISDMSGEQQKMSDSIQSISAISQQSAAAAEEVSASANEQLTALESIAKSAEALS
EANQELLNAINKFNV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=348, Percent_Identity=29.0229885057471, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1788195, Length=324, Percent_Identity=26.8518518518519, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI2367378, Length=334, Percent_Identity=25.748502994012, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1788194, Length=356, Percent_Identity=26.4044943820225, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1789453, Length=375, Percent_Identity=23.4666666666667, Blast_Score=86, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 71379; Mature: 71379

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKLHVKIAGFVAVLLVLTVIVLQFSTTHLLKSMLEDEAKESTSSLLGSIKRNIELQLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE
HYEISLNRISDGEMAHSFLKDGDNKIIKIVNDELKQLKEKNEYVNLAYIGTKKKEMFTFP
EEEEEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCEEEEEEECCCCHHHEECC
KTTFDDDYNPAERPWYTSAAKTPDKVVWTEPYKDAVSGDMTVTAAKAIVVNNKVEGVVSI
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCEEEEEHHEEEECCCCCEEEEE
DLSLNSLNKIIENQKMPYDGYAFILDQNGTMLAHPSKQGDDISNDKTYRDIPSSKDGIKV
EECHHHHHHHHHCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
GKDTVIAYQTVGGTGWKVGTQFDTAKLMWVAQEMNKMVIIVSIIALAAAIILSYFVAKTI
CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
TGPIKQLIAKTKAVAGGDLTVQTAAASKDEIGILTKDFNKMVEHMKEMIVQVRSSSGKVS
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
DTTDQLSAVSEETVSASDEIAKAIEEVATGATEQAAEVENVNEQSERLSVKIKEIEHHAD
CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SIKKLSRTSEEASYTGIDALGQLLAKSNEANSETKKVEHMLFQLEEKTKNIEDVVTAISA
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ISDQTNLLALNASIEAARAGESGRGFAVVAEEVRKLAEQSAVSSQHISETVKQIQMETKE
HCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVSAMTEASKMNEVQNGMIHETGEALSKITAEMQALVNSIDHIYSEISDMSGEQQKMSDS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IQSISAISQQSAAAAEEVSASANEQLTALESIAKSAEALSEANQELLNAINKFNV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKKLHVKIAGFVAVLLVLTVIVLQFSTTHLLKSMLEDEAKESTSSLLGSIKRNIELQLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE
HYEISLNRISDGEMAHSFLKDGDNKIIKIVNDELKQLKEKNEYVNLAYIGTKKKEMFTFP
EEEEEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCEEEEEEECCCCHHHEECC
KTTFDDDYNPAERPWYTSAAKTPDKVVWTEPYKDAVSGDMTVTAAKAIVVNNKVEGVVSI
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCEEEEEHHEEEECCCCCEEEEE
DLSLNSLNKIIENQKMPYDGYAFILDQNGTMLAHPSKQGDDISNDKTYRDIPSSKDGIKV
EECHHHHHHHHHCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
GKDTVIAYQTVGGTGWKVGTQFDTAKLMWVAQEMNKMVIIVSIIALAAAIILSYFVAKTI
CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
TGPIKQLIAKTKAVAGGDLTVQTAAASKDEIGILTKDFNKMVEHMKEMIVQVRSSSGKVS
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
DTTDQLSAVSEETVSASDEIAKAIEEVATGATEQAAEVENVNEQSERLSVKIKEIEHHAD
CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SIKKLSRTSEEASYTGIDALGQLLAKSNEANSETKKVEHMLFQLEEKTKNIEDVVTAISA
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ISDQTNLLALNASIEAARAGESGRGFAVVAEEVRKLAEQSAVSSQHISETVKQIQMETKE
HCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVSAMTEASKMNEVQNGMIHETGEALSKITAEMQALVNSIDHIYSEISDMSGEQQKMSDS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IQSISAISQQSAAAAEEVSASANEQLTALESIAKSAEALSEANQELLNAINKFNV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353924; 9384377 [H]