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The map label for this gene is yqaT [H]

Identifier: 52785229

GI number: 52785229

Start: 1441214

End: 1442491

Strand: Direct

Name: yqaT [H]

Synonym: BLi01464

Alternate gene names: 52785229

Gene position: 1441214-1442491 (Clockwise)

Preceding gene: 52785228

Following gene: 52785230

Centisome position: 34.13

GC content: 44.13

Gene sequence:

>1278_bases
ATGATGGAAAAAGAAGTGAATCCCCGTTTTAGGGACTTTCTTTTTGATTGGTCGCAGAAGTTTTATTTTCTCGTTGGCGG
TTACGGATCATCCAAGAGCTATCATGTTGCTCTCAAGCTGATTTTGAAGATGCTACAGGAAAAGCGGACAGCCTTAGTCG
TCCGTGAGGTCTACGACACCCACAGGGATTCGACCTTTTCCCTGCTCGAAGAAATCATTACCGACTTAGGGCTTGACCAT
AAAATCCGGTGTGTCAGCTCACCAATGCAAATACGATTCCCAAACGGCAGCAAGATCATTTTTAAAGGGATGGACAAGCC
GGCAAAACTAAAATCGATCAATAATGTATCAATTGTATGGGTTGAAGAGTGTTCAGAAGTGAAATATGACGGATTTAAGG
AGCTGCTGGGGCGCTTGCGACATCCGACTTTAAAATTACACATGATTCTGTCCACGAACCCTGTCAGCAAAGGGAACTGG
TCGTATAAGCACTTTTTTAAGGATGAAGCCAATCAGTTTTTTGTCCTTGACGACGACGAGCTTTACAAAAAGAAAACGAT
CATAAAAAACAACACCTATTATCATCACTCAACGGCTGATGATAATTTATTTTTGCCTGAAAGCTACATCGAGCAGCTGG
AAGACCTAAAAAGCCACGATCCAGACCTTTACCGCATTGCCCGGAAAGGTCGTTTTGGCGTTAACGGAAAGCTTGTCCTG
CCGCAGTTCGAAGTGATGGAGCACGAAAAGGTTATGAATGCGATCAGAGCAATCGACAGGCCGATCTTAAAAAACGGTAT
GGACTTTGGTTTCGTTGATTCATATAACGCCTTGGTTCGCATGGCGATCGACCACAATCAAAAGATTCTATATATCTACT
GGCAGTATTACAAAAACGATACGACAGACGACAAAACAGCGGAAGACCTGAAAGACCTTAAACGCGTTCTGATCAAAGCT
GATAGCGCGGAGCCTAAGACAATTCGATTCTTCCGGCAACAGGGGTTCCGTATGAAGGCCGCAAAGAAATTCCAAGGCTC
ACGACTGCAATACACCAAGAAGGTGAAGCGGTTCAAAAAGATTATCTGCTCCGATCAATGCCCTGACGTTATTAGGGAGC
TGAAAGATTTGACTTTCGCAGTGGATAAAGACGGAAACGTCATTGAAGACGAATTCAACATCGATCCACATACTTTCTCG
GCCATCTGGTACGGCTTAGATGATTATGAGGTATCAAGTCTCAAGGGGCACGGGGTAACAAGGAGGTTTAGAGATTGA

Upstream 100 bases:

>100_bases
TGCGCTTGAACATCGATAAGACGAAAGCCGAAATCGAGCGACTGAACGACGATGAAAACGACTCAACATTTGAAATTATC
ATCAAGGATAAAGGTGAAAG

Downstream 100 bases:

>100_bases
TAAAATTCTTAGATCAAATTAGAACAAAGGGCATATCGGGGGAATTGATTTCTCAGATTATCGAAGAGCATAAAGATGAC
CATGACCGCATGAAGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF50 [H]

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MMEKEVNPRFRDFLFDWSQKFYFLVGGYGSSKSYHVALKLILKMLQEKRTALVVREVYDTHRDSTFSLLEEIITDLGLDH
KIRCVSSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIVWVEECSEVKYDGFKELLGRLRHPTLKLHMILSTNPVSKGNW
SYKHFFKDEANQFFVLDDDELYKKKTIIKNNTYYHHSTADDNLFLPESYIEQLEDLKSHDPDLYRIARKGRFGVNGKLVL
PQFEVMEHEKVMNAIRAIDRPILKNGMDFGFVDSYNALVRMAIDHNQKILYIYWQYYKNDTTDDKTAEDLKDLKRVLIKA
DSAEPKTIRFFRQQGFRMKAAKKFQGSRLQYTKKVKRFKKIICSDQCPDVIRELKDLTFAVDKDGNVIEDEFNIDPHTFS
AIWYGLDDYEVSSLKGHGVTRRFRD

Sequences:

>Translated_425_residues
MMEKEVNPRFRDFLFDWSQKFYFLVGGYGSSKSYHVALKLILKMLQEKRTALVVREVYDTHRDSTFSLLEEIITDLGLDH
KIRCVSSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIVWVEECSEVKYDGFKELLGRLRHPTLKLHMILSTNPVSKGNW
SYKHFFKDEANQFFVLDDDELYKKKTIIKNNTYYHHSTADDNLFLPESYIEQLEDLKSHDPDLYRIARKGRFGVNGKLVL
PQFEVMEHEKVMNAIRAIDRPILKNGMDFGFVDSYNALVRMAIDHNQKILYIYWQYYKNDTTDDKTAEDLKDLKRVLIKA
DSAEPKTIRFFRQQGFRMKAAKKFQGSRLQYTKKVKRFKKIICSDQCPDVIRELKDLTFAVDKDGNVIEDEFNIDPHTFS
AIWYGLDDYEVSSLKGHGVTRRFRD
>Mature_425_residues
MMEKEVNPRFRDFLFDWSQKFYFLVGGYGSSKSYHVALKLILKMLQEKRTALVVREVYDTHRDSTFSLLEEIITDLGLDH
KIRCVSSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIVWVEECSEVKYDGFKELLGRLRHPTLKLHMILSTNPVSKGNW
SYKHFFKDEANQFFVLDDDELYKKKTIIKNNTYYHHSTADDNLFLPESYIEQLEDLKSHDPDLYRIARKGRFGVNGKLVL
PQFEVMEHEKVMNAIRAIDRPILKNGMDFGFVDSYNALVRMAIDHNQKILYIYWQYYKNDTTDDKTAEDLKDLKRVLIKA
DSAEPKTIRFFRQQGFRMKAAKKFQGSRLQYTKKVKRFKKIICSDQCPDVIRELKDLTFAVDKDGNVIEDEFNIDPHTFS
AIWYGLDDYEVSSLKGHGVTRRFRD

Specific function: May function as a terminase [H]

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xtmB and phage SPP1 terminase large subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 49965; Mature: 49965

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEKEVNPRFRDFLFDWSQKFYFLVGGYGSSKSYHVALKLILKMLQEKRTALVVREVYDT
CCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
HRDSTFSLLEEIITDLGLDHKIRCVSSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIVW
CCCHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCEEEEECCCCCHHHCCCCCEEEEE
VEECSEVKYDGFKELLGRLRHPTLKLHMILSTNPVSKGNWSYKHFFKDEANQFFVLDDDE
EECCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHCCCCEEEEECCHH
LYKKKTIIKNNTYYHHSTADDNLFLPESYIEQLEDLKSHDPDLYRIARKGRFGVNGKLVL
HHHHHHEEECCCEEEECCCCCCEECCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEC
PQFEVMEHEKVMNAIRAIDRPILKNGMDFGFVDSYNALVRMAIDHNQKILYIYWQYYKND
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCEEEEEEEEEECCC
TTDDKTAEDLKDLKRVLIKADSAEPKTIRFFRQQGFRMKAAKKFQGSRLQYTKKVKRFKK
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEHHHHHCCCCHHHHHHHHHHHHH
IICSDQCPDVIRELKDLTFAVDKDGNVIEDEFNIDPHTFSAIWYGLDDYEVSSLKGHGVT
HHCCCCCHHHHHHHHHCEEEECCCCCEECCCCCCCCCEEEHEEECCCCCEECCCCCCCCC
RRFRD
CCCCC
>Mature Secondary Structure
MMEKEVNPRFRDFLFDWSQKFYFLVGGYGSSKSYHVALKLILKMLQEKRTALVVREVYDT
CCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
HRDSTFSLLEEIITDLGLDHKIRCVSSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIVW
CCCHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCEEEEECCCCCHHHCCCCCEEEEE
VEECSEVKYDGFKELLGRLRHPTLKLHMILSTNPVSKGNWSYKHFFKDEANQFFVLDDDE
EECCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHCCCCEEEEECCHH
LYKKKTIIKNNTYYHHSTADDNLFLPESYIEQLEDLKSHDPDLYRIARKGRFGVNGKLVL
HHHHHHEEECCCEEEECCCCCCEECCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEC
PQFEVMEHEKVMNAIRAIDRPILKNGMDFGFVDSYNALVRMAIDHNQKILYIYWQYYKND
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCEEEEEEEEEECCC
TTDDKTAEDLKDLKRVLIKADSAEPKTIRFFRQQGFRMKAAKKFQGSRLQYTKKVKRFKK
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEHHHHHCCCCHHHHHHHHHHHHH
IICSDQCPDVIRELKDLTFAVDKDGNVIEDEFNIDPHTFSAIWYGLDDYEVSSLKGHGVT
HHCCCCCHHHHHHHHHCEEEECCCCCEECCCCCCCCCEEEHEEECCCCCEECCCCCCCCC
RRFRD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]