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The map label for this gene is yqaQ [H]

Identifier: 52785225

GI number: 52785225

Start: 1439265

End: 1439720

Strand: Direct

Name: yqaQ [H]

Synonym: BLi01460

Alternate gene names: 52785225

Gene position: 1439265-1439720 (Clockwise)

Preceding gene: 52785224

Following gene: 52785226

Centisome position: 34.08

GC content: 46.71

Gene sequence:

>456_bases
ATGTATAAAAAAGAGATTGAAAAACTGATCAGTAGTTATCACTGGATGGCAAAAGAGGTTCAGAGATTGCAAAGGGTGCT
TTACGGTTCTGACATCCCTATGCGAAGCTGGGGTGTCGCTCAATATGGGTTAGAAGCTGCCATGCCAAAGGGAAGCCCCG
GCAAGAGTCAGGCCGAGCTGAGGGATATGGACATAAGAGAGGAACGTCTATACAAGCGTCTAGAATACTTCGAAGAACGT
GTATACGCGATTGAGGCGGCAGCAAGAACGATCGAAGGGGAACAGCATAAAGTGATTTATGATTGCATGATGGAAGGGAT
GAGCTATCGAGCCATTGGCCTTCATCTTGGCATATCGCGGGAAACCGTCAGGCGGATGAAAGACGAGATCATCAACCAGT
TGTGCCAAAATTGCCGAATTGTGCAGTTGTTGAATCCGAAAAAATCCGTCGTGTAA

Upstream 100 bases:

>100_bases
AAGTGGTGTGGATCTATTTCCTTATTACATTTGTACCGATCATATCAAAAGCGATTTACCGAAAGCTCTTTAGCCAAAAT
AGAAAGGGCGGGAATTGATC

Downstream 100 bases:

>100_bases
AATGGAAGGCAGGACGGGGAGGTAGGTTCCCCGGTTTACCACTTCACAAAATTAAGAGAGAAAGAGCGGCACTGCGAATG
CGCGGGGTCGCTTTTTATGT

Product: YqaQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MYKKEIEKLISSYHWMAKEVQRLQRVLYGSDIPMRSWGVAQYGLEAAMPKGSPGKSQAELRDMDIREERLYKRLEYFEER
VYAIEAAARTIEGEQHKVIYDCMMEGMSYRAIGLHLGISRETVRRMKDEIINQLCQNCRIVQLLNPKKSVV

Sequences:

>Translated_151_residues
MYKKEIEKLISSYHWMAKEVQRLQRVLYGSDIPMRSWGVAQYGLEAAMPKGSPGKSQAELRDMDIREERLYKRLEYFEER
VYAIEAAARTIEGEQHKVIYDCMMEGMSYRAIGLHLGISRETVRRMKDEIINQLCQNCRIVQLLNPKKSVV
>Mature_151_residues
MYKKEIEKLISSYHWMAKEVQRLQRVLYGSDIPMRSWGVAQYGLEAAMPKGSPGKSQAELRDMDIREERLYKRLEYFEER
VYAIEAAARTIEGEQHKVIYDCMMEGMSYRAIGLHLGISRETVRRMKDEIINQLCQNCRIVQLLNPKKSVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis pcf and to sigma factors [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17720; Mature: 17720

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKEIEKLISSYHWMAKEVQRLQRVLYGSDIPMRSWGVAQYGLEAAMPKGSPGKSQAEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHH
RDMDIREERLYKRLEYFEERVYAIEAAARTIEGEQHKVIYDCMMEGMSYRAIGLHLGISR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCH
ETVRRMKDEIINQLCQNCRIVQLLNPKKSVV
HHHHHHHHHHHHHHHHCCEEEEEECCCCCCC
>Mature Secondary Structure
MYKKEIEKLISSYHWMAKEVQRLQRVLYGSDIPMRSWGVAQYGLEAAMPKGSPGKSQAEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHH
RDMDIREERLYKRLEYFEERVYAIEAAARTIEGEQHKVIYDCMMEGMSYRAIGLHLGISR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCH
ETVRRMKDEIINQLCQNCRIVQLLNPKKSVV
HHHHHHHHHHHHHHHHCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]