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The map label for this gene is yqaM [H]

Identifier: 52785210

GI number: 52785210

Start: 1432967

End: 1433782

Strand: Direct

Name: yqaM [H]

Synonym: BLi01443

Alternate gene names: 52785210

Gene position: 1432967-1433782 (Clockwise)

Preceding gene: 52785209

Following gene: 52785211

Centisome position: 33.94

GC content: 42.65

Gene sequence:

>816_bases
GTGTTTTATCGGGTTCATAAAGATACGAAATGGAATTATGACGAACGGTTAAAGCAACTTGTGCCAGAGGAAATGGTGCC
GGAAGATGATTTTCTTTCTGGAAAGGTTTGTCCGCCGGAAAAGGCAGGGGAATGGAAGGATACCTATTCCAAACAATGCG
ACTGTGTACGGCGAAAGAGAATAGCCCGACTTATGGCAGCCAGTGGCATTACAGAAGAATTTGAAAAGCTTATATTCGGC
AATTTTAAAACGGAGGGGAAACCAAAATTGATAAAGGATGCATATGATTGCGCTGTTGAATACTTCAAGGATTTTGAAAA
AATCAGGGGGGATCGTTCAAACAGTATCGCTTTGCTTGGTCAACCCGGCAGCGGCAAAACTCATCTGCTTACAGCCATTA
TGAATAATCTCATCAAGAAGAAGTCCGTCCACTGTTTGTATTTCCCGTATGTAGAAGGCATGGGGGATCTGAAAAAGGAC
TTTGATCAATTGGAAACCAAGCTTGATGCGATGCGGAAAGTCGAAGTGCTTTTCATTGATGACTTGTTCAAGCCTGTATA
TGTAACCACTAGTGAAGGGCGTATCAAGAAACCACGGGCGACCGAATGGCAGATTGAACAAATTCAGTCCATCGTAAATT
ATCGTTACCTGAATCATCTGCCGTTACTTGTTTCTTCAGAACTTACAACAGATGAGTTGCTGGACATTGATGAAGCTCTC
GGCTCCCGAATCCATCAAATGTGCCGGGATTATACGGTAATCATCAAGGGGGACATGATGTTGCTGAATCATAGATTGTC
AGATTTAAGTGATTAG

Upstream 100 bases:

>100_bases
GATGCAAAGCCTTCGGGAAAAATCAGCCCACTTTTCGGCCCCGGACGCATCCGGAGAAAAGGCTGAGTACGAATGTGAAA
CCTGTAAAGATCATGGCATT

Downstream 100 bases:

>100_bases
CAAACATTTCATTAACAAAAACACCGAAACCTAAAGGCTCCGATGCTTTATGAACTGTGGGTAATTCAATTATAGCACAC
TGGGGGCGGTTTGAGTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MFYRVHKDTKWNYDERLKQLVPEEMVPEDDFLSGKVCPPEKAGEWKDTYSKQCDCVRRKRIARLMAASGITEEFEKLIFG
NFKTEGKPKLIKDAYDCAVEYFKDFEKIRGDRSNSIALLGQPGSGKTHLLTAIMNNLIKKKSVHCLYFPYVEGMGDLKKD
FDQLETKLDAMRKVEVLFIDDLFKPVYVTTSEGRIKKPRATEWQIEQIQSIVNYRYLNHLPLLVSSELTTDELLDIDEAL
GSRIHQMCRDYTVIIKGDMMLLNHRLSDLSD

Sequences:

>Translated_271_residues
MFYRVHKDTKWNYDERLKQLVPEEMVPEDDFLSGKVCPPEKAGEWKDTYSKQCDCVRRKRIARLMAASGITEEFEKLIFG
NFKTEGKPKLIKDAYDCAVEYFKDFEKIRGDRSNSIALLGQPGSGKTHLLTAIMNNLIKKKSVHCLYFPYVEGMGDLKKD
FDQLETKLDAMRKVEVLFIDDLFKPVYVTTSEGRIKKPRATEWQIEQIQSIVNYRYLNHLPLLVSSELTTDELLDIDEAL
GSRIHQMCRDYTVIIKGDMMLLNHRLSDLSD
>Mature_271_residues
MFYRVHKDTKWNYDERLKQLVPEEMVPEDDFLSGKVCPPEKAGEWKDTYSKQCDCVRRKRIARLMAASGITEEFEKLIFG
NFKTEGKPKLIKDAYDCAVEYFKDFEKIRGDRSNSIALLGQPGSGKTHLLTAIMNNLIKKKSVHCLYFPYVEGMGDLKKD
FDQLETKLDAMRKVEVLFIDDLFKPVYVTTSEGRIKKPRATEWQIEQIQSIVNYRYLNHLPLLVSSELTTDELLDIDEAL
GSRIHQMCRDYTVIIKGDMMLLNHRLSDLSD

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqxC and T.hyodysenteriae hemolysin tlyA [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013317 [H]

Pfam domain/function: PF00308 Bac_DnaA [H]

EC number: NA

Molecular weight: Translated: 31491; Mature: 31491

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYRVHKDTKWNYDERLKQLVPEEMVPEDDFLSGKVCPPEKAGEWKDTYSKQCDCVRRKR
CCEEECCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
IARLMAASGITEEFEKLIFGNFKTEGKPKLIKDAYDCAVEYFKDFEKIRGDRSNSIALLG
HHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
QPGSGKTHLLTAIMNNLIKKKSVHCLYFPYVEGMGDLKKDFDQLETKLDAMRKVEVLFID
CCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEHH
DLFKPVYVTTSEGRIKKPRATEWQIEQIQSIVNYRYLNHLPLLVSSELTTDELLDIDEAL
HCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHH
GSRIHQMCRDYTVIIKGDMMLLNHRLSDLSD
HHHHHHHHHCEEEEEECCHHHHHHHHHCCCC
>Mature Secondary Structure
MFYRVHKDTKWNYDERLKQLVPEEMVPEDDFLSGKVCPPEKAGEWKDTYSKQCDCVRRKR
CCEEECCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
IARLMAASGITEEFEKLIFGNFKTEGKPKLIKDAYDCAVEYFKDFEKIRGDRSNSIALLG
HHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
QPGSGKTHLLTAIMNNLIKKKSVHCLYFPYVEGMGDLKKDFDQLETKLDAMRKVEVLFID
CCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEHH
DLFKPVYVTTSEGRIKKPRATEWQIEQIQSIVNYRYLNHLPLLVSSELTTDELLDIDEAL
HCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHH
GSRIHQMCRDYTVIIKGDMMLLNHRLSDLSD
HHHHHHHHHCEEEEEECCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]