Click here to switch to the map view.

The map label for this gene is yqaJ [H]

Identifier: 52785207

GI number: 52785207

Start: 1430318

End: 1431256

Strand: Direct

Name: yqaJ [H]

Synonym: BLi01440

Alternate gene names: 52785207

Gene position: 1430318-1431256 (Clockwise)

Preceding gene: 52785206

Following gene: 52785208

Centisome position: 33.87

GC content: 47.6

Gene sequence:

>939_bases
ATGGCTAAAATCCTTACATCTACCGAAGGAATGGAACGACAAGCATGGTTAGAAGCGCGACGGCGAGGCATTGGTGGGAG
CGATGTTTCTGCCATACTCGGACTTAACAAGTGGAAAAGTCCCATTCAATTATACATGGATAAGATCGGCGAAAGTCCTT
TAGAGGATAACGAAAGCGAGGCGGCAAGGCTCGGGAATCTATTGGAGGACATCGTAGCCCAGGAATTCAGCCGGAGGAAA
GGGCTGAAAGTGAAGAAGCGGAACGCCATTTTACAACATGAGAAATACCCGTATTTTTTGGCGAATGTTGACCGCCTGAT
TGTCGGCCGGAAGGAAGGTCTTGAGTGCAAGACGGCGACAGTTTACAAGCGTGATGAATGGACGGCAGACAGCGTGCCCG
ATGCGTATTTTGTTCAATGCCAATGGTACATGAGTGTAACCGGGTTCAAAAAATGGCATTTGGCCGCCCTTATATTAGGG
GATGTTGTGAACCCTTGGCGATTCCATGAGATCGAGCGCGACGATGAATTGATACGGATCATGGAAGAAAAGGCGGCTTA
TTTCTGGAATGAACACGTTTCTAAAAGAGTGCCGCCGCCGTTTGACGGGTCGCAATCATCAAAGGATTTACTGGCGGCCA
TGTACCCGGAGCATGTCGAGGATTCGGTTGATCTGCCGGGATACTTTGATAGCAAGATTGAAGAATACGAGCGGACGAAA
GAGAAGATCAACGAACTGACAGAGAAGAAGCAGGCCATTGAAAACGAGATCAAAGGGATTCTCGGTGAAAGGAAACACGG
TTTTGTTGCTGACAAAAAAGTCACTTGGTCGAGGTTCCCGGTTGAACGCTTTGACAAAGAAAAATTCAAGAGAGAACACC
CTGACATCTACAGGCAGTATGTGAAAGAGGGTAACGGTTCAAGATTTTCAATCCGGTAA

Upstream 100 bases:

>100_bases
CAAGTGTTGAATTAATTGGCTGGTGGAAAGGCGTAGATAAACTTTCCAAATACAAATTATATCAGTCTTCTGCCTGAAAA
ACAATATAGAAGGTGAAAGA

Downstream 100 bases:

>100_bases
TGAAAGGGGAAAACGGTATGACACAAGCAGAGAAATTGAAAAACGACATAGCGAAGCAGGAGCAAAGAAACGAGGTTGCT
CAAGATGATAAACCAAAAAC

Product: YqaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MAKILTSTEGMERQAWLEARRRGIGGSDVSAILGLNKWKSPIQLYMDKIGESPLEDNESEAARLGNLLEDIVAQEFSRRK
GLKVKKRNAILQHEKYPYFLANVDRLIVGRKEGLECKTATVYKRDEWTADSVPDAYFVQCQWYMSVTGFKKWHLAALILG
DVVNPWRFHEIERDDELIRIMEEKAAYFWNEHVSKRVPPPFDGSQSSKDLLAAMYPEHVEDSVDLPGYFDSKIEEYERTK
EKINELTEKKQAIENEIKGILGERKHGFVADKKVTWSRFPVERFDKEKFKREHPDIYRQYVKEGNGSRFSIR

Sequences:

>Translated_312_residues
MAKILTSTEGMERQAWLEARRRGIGGSDVSAILGLNKWKSPIQLYMDKIGESPLEDNESEAARLGNLLEDIVAQEFSRRK
GLKVKKRNAILQHEKYPYFLANVDRLIVGRKEGLECKTATVYKRDEWTADSVPDAYFVQCQWYMSVTGFKKWHLAALILG
DVVNPWRFHEIERDDELIRIMEEKAAYFWNEHVSKRVPPPFDGSQSSKDLLAAMYPEHVEDSVDLPGYFDSKIEEYERTK
EKINELTEKKQAIENEIKGILGERKHGFVADKKVTWSRFPVERFDKEKFKREHPDIYRQYVKEGNGSRFSIR
>Mature_311_residues
AKILTSTEGMERQAWLEARRRGIGGSDVSAILGLNKWKSPIQLYMDKIGESPLEDNESEAARLGNLLEDIVAQEFSRRKG
LKVKKRNAILQHEKYPYFLANVDRLIVGRKEGLECKTATVYKRDEWTADSVPDAYFVQCQWYMSVTGFKKWHLAALILGD
VVNPWRFHEIERDDELIRIMEEKAAYFWNEHVSKRVPPPFDGSQSSKDLLAAMYPEHVEDSVDLPGYFDSKIEEYERTKE
KINELTEKKQAIENEIKGILGERKHGFVADKKVTWSRFPVERFDKEKFKREHPDIYRQYVKEGNGSRFSIR

Specific function: Unknown

COG id: COG5377

COG function: function code L; Phage-related protein, predicted endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011604
- InterPro:   IPR017482
- InterPro:   IPR011335
- InterPro:   IPR019080 [H]

Pfam domain/function: PF09588 YqaJ [H]

EC number: NA

Molecular weight: Translated: 36426; Mature: 36295

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKILTSTEGMERQAWLEARRRGIGGSDVSAILGLNKWKSPIQLYMDKIGESPLEDNESE
CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCHHCCHHHHHHHHHHCCCCCCCCHHH
AARLGNLLEDIVAQEFSRRKGLKVKKRNAILQHEKYPYFLANVDRLIVGRKEGLECKTAT
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEE
VYKRDEWTADSVPDAYFVQCQWYMSVTGFKKWHLAALILGDVVNPWRFHEIERDDELIRI
EEECCCCCCCCCCCEEEEEEEEEEHHCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHH
MEEKAAYFWNEHVSKRVPPPFDGSQSSKDLLAAMYPEHVEDSVDLPGYFDSKIEEYERTK
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHH
EKINELTEKKQAIENEIKGILGERKHGFVADKKVTWSRFPVERFDKEKFKREHPDIYRQY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH
VKEGNGSRFSIR
HHCCCCCEECCC
>Mature Secondary Structure 
AKILTSTEGMERQAWLEARRRGIGGSDVSAILGLNKWKSPIQLYMDKIGESPLEDNESE
CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCHHCCHHHHHHHHHHCCCCCCCCHHH
AARLGNLLEDIVAQEFSRRKGLKVKKRNAILQHEKYPYFLANVDRLIVGRKEGLECKTAT
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEE
VYKRDEWTADSVPDAYFVQCQWYMSVTGFKKWHLAALILGDVVNPWRFHEIERDDELIRI
EEECCCCCCCCCCCEEEEEEEEEEHHCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHH
MEEKAAYFWNEHVSKRVPPPFDGSQSSKDLLAAMYPEHVEDSVDLPGYFDSKIEEYERTK
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHH
EKINELTEKKQAIENEIKGILGERKHGFVADKKVTWSRFPVERFDKEKFKREHPDIYRQY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH
VKEGNGSRFSIR
HHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]