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The map label for this gene is gpmB [H]

Identifier: 52785187

GI number: 52785187

Start: 1413956

End: 1414588

Strand: Direct

Name: gpmB [H]

Synonym: BLi01419

Alternate gene names: 52785187

Gene position: 1413956-1414588 (Clockwise)

Preceding gene: 52785185

Following gene: 52785192

Centisome position: 33.49

GC content: 47.24

Gene sequence:

>633_bases
TTGCTTACATTGTATATTGCAAGACACGGTCAGACGGAATGGAATATTGAAAAAAGAATGCAAGGCTGGGAAGACTCCAA
TTTAACGGCTTTGGGACTGGCAAACGCAAATGCCCTCGGCGAACGGCTGAAAGATGTTCAATTCCAAGCCGCATATTCCA
GTCCAAGCGGCCGGGCCGTTGATTCTGCGCGGGCTATGCTGCAGAACCGCAGCATTCCCTTTATAACAGACGACAGATTA
AAAGAAATCTCGATCGGCCGCTGGGAAGGGAAAACGTATGATGAGATCAAACAAAGTGATCCTGACTTGCTGGAAGCGTA
TTTTAATACGCCTGAAACATATATGCCCGATGAAAGCGAGAGCTTTTACGATTTTGAAAGGCGGGTCAGTCAGGCGTATC
AATTCATTCTCCGCCGCCATCGGGAAGGCAATGTCCTCATTGTCAGCCATTCCGTGTTTATATTGATGCTCTTGAATCTT
ATAAAAAAGAGGCCGGTCGGTGAACTATGGAACTCAAGCTATGTTCATGACACAGCTCTTGCGGTTGTAACGGTTTCCGA
GGATGGAAGCGCCGCGATTGAAAGAGAAGGAGACGGTGAACATAGAGTAGAAGCAAAGAATGCCACCTGGTAG

Upstream 100 bases:

>100_bases
ACCCGGCAAAATAAACACATGTCAGAATATTCAGCATATTTGATTTCAAACCGCACATCGCATACAATGAATGCTAGAAT
AATGAACGGGGGATGATGTT

Downstream 100 bases:

>100_bases
GCATGCCAAAAAGCCTGATGTTGGAATCAGGCTCCGAGGCTCCTAGCCGGAATATATTTTGGCACTGAAGCTGTGAAGCG
TGTCGGCGGTAATCGTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: PGAM; Phosphoglyceromutase [H]

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MLTLYIARHGQTEWNIEKRMQGWEDSNLTALGLANANALGERLKDVQFQAAYSSPSGRAVDSARAMLQNRSIPFITDDRL
KEISIGRWEGKTYDEIKQSDPDLLEAYFNTPETYMPDESESFYDFERRVSQAYQFILRRHREGNVLIVSHSVFILMLLNL
IKKRPVGELWNSSYVHDTALAVVTVSEDGSAAIEREGDGEHRVEAKNATW

Sequences:

>Translated_210_residues
MLTLYIARHGQTEWNIEKRMQGWEDSNLTALGLANANALGERLKDVQFQAAYSSPSGRAVDSARAMLQNRSIPFITDDRL
KEISIGRWEGKTYDEIKQSDPDLLEAYFNTPETYMPDESESFYDFERRVSQAYQFILRRHREGNVLIVSHSVFILMLLNL
IKKRPVGELWNSSYVHDTALAVVTVSEDGSAAIEREGDGEHRVEAKNATW
>Mature_210_residues
MLTLYIARHGQTEWNIEKRMQGWEDSNLTALGLANANALGERLKDVQFQAAYSSPSGRAVDSARAMLQNRSIPFITDDRL
KEISIGRWEGKTYDEIKQSDPDLLEAYFNTPETYMPDESESFYDFERRVSQAYQFILRRHREGNVLIVSHSVFILMLLNL
IKKRPVGELWNSSYVHDTALAVVTVSEDGSAAIEREGDGEHRVEAKNATW

Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790856, Length=166, Percent_Identity=31.3253012048193, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1786857, Length=170, Percent_Identity=28.2352941176471, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR023086 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 24002; Mature: 24002

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00175 PG_MUTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLYIARHGQTEWNIEKRMQGWEDSNLTALGLANANALGERLKDVQFQAAYSSPSGRAV
CEEEEEEECCCCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHEEEEECCCCCCCHH
DSARAMLQNRSIPFITDDRLKEISIGRWEGKTYDEIKQSDPDLLEAYFNTPETYMPDESE
HHHHHHHHCCCCCEEECCCHHHCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCC
SFYDFERRVSQAYQFILRRHREGNVLIVSHSVFILMLLNLIKKRPVGELWNSSYVHDTAL
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHCCCCEECEEE
AVVTVSEDGSAAIEREGDGEHRVEAKNATW
EEEEECCCCCEEEECCCCCCCEEECCCCCC
>Mature Secondary Structure
MLTLYIARHGQTEWNIEKRMQGWEDSNLTALGLANANALGERLKDVQFQAAYSSPSGRAV
CEEEEEEECCCCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHEEEEECCCCCCCHH
DSARAMLQNRSIPFITDDRLKEISIGRWEGKTYDEIKQSDPDLLEAYFNTPETYMPDESE
HHHHHHHHCCCCCEEECCCHHHCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCC
SFYDFERRVSQAYQFILRRHREGNVLIVSHSVFILMLLNLIKKRPVGELWNSSYVHDTAL
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHCCCCEECEEE
AVVTVSEDGSAAIEREGDGEHRVEAKNATW
EEEEECCCCCEEEECCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA