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The map label for this gene is ykkA [H]

Identifier: 52785176

GI number: 52785176

Start: 1405895

End: 1406416

Strand: Direct

Name: ykkA [H]

Synonym: BLi01408

Alternate gene names: 52785176

Gene position: 1405895-1406416 (Clockwise)

Preceding gene: 52785175

Following gene: 52785177

Centisome position: 33.29

GC content: 49.04

Gene sequence:

>522_bases
ATGCCGTTTTTGAAAGATTTATCTCCAGATGAAGAGATGGCGCCGACAGTCGGGCTGCTTTTTTCGGCGGTCAATGAAAA
CATCGAACGGCTGAAATCAATCGTCTCCGGCATCAGCCGGGAAGAGCTGGAATATAAGGGTGAGCATGGCGACAAAAACA
GCATCGCCCAGCTGATCTATCATTTAATCAATGTCGATGTCCGCTGGGTTTACAGGCTGAAGGAAAGCGAAATTCCAAGA
GAGCTGGAAGAGAAATACGGACCGATGACGGATGAAAACGGACGTTTGCCGGAGGTGACAGGCGTCCCTTTGACCGTGTT
AATCGAGTGGCATGAAGAGGTGCTGGAGATGTTGAAACACACCGCTAAAGGCTTTTCGGAAAAAGACTTGCTGAAGAAGG
TTCCGTATGAGGGAGGGTTTTCGACGATCCGCTGGGGGATCTGGCATATGTCTGATCATAACCGCTATCACCAGGCGCAT
ATTCAGGCTTGCTTAAAAGAGTTCCGCATGCAAAACAGTTGA

Upstream 100 bases:

>100_bases
ACAACGGCGTCGGCTGTCGCTGCCTACTATGGTTTCAGTTTCCTCGCTCCTGAAAATGAAGGGCTGCTGAAAAATATCTT
TAAACAGGAGGAGTGAAGAT

Downstream 100 bases:

>100_bases
TTTTTTCGTATGATTTGGTATGATGCTAATTAGCAAACTTCATAACGTTAAAGTTTTCTAGGGTTCCGCACATTCGTATG
TGGCCTGGTCCGAGAGAAAA

Product: YkkA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MPFLKDLSPDEEMAPTVGLLFSAVNENIERLKSIVSGISREELEYKGEHGDKNSIAQLIYHLINVDVRWVYRLKESEIPR
ELEEKYGPMTDENGRLPEVTGVPLTVLIEWHEEVLEMLKHTAKGFSEKDLLKKVPYEGGFSTIRWGIWHMSDHNRYHQAH
IQACLKEFRMQNS

Sequences:

>Translated_173_residues
MPFLKDLSPDEEMAPTVGLLFSAVNENIERLKSIVSGISREELEYKGEHGDKNSIAQLIYHLINVDVRWVYRLKESEIPR
ELEEKYGPMTDENGRLPEVTGVPLTVLIEWHEEVLEMLKHTAKGFSEKDLLKKVPYEGGFSTIRWGIWHMSDHNRYHQAH
IQACLKEFRMQNS
>Mature_172_residues
PFLKDLSPDEEMAPTVGLLFSAVNENIERLKSIVSGISREELEYKGEHGDKNSIAQLIYHLINVDVRWVYRLKESEIPRE
LEEKYGPMTDENGRLPEVTGVPLTVLIEWHEEVLEMLKHTAKGFSEKDLLKKVPYEGGFSTIRWGIWHMSDHNRYHQAHI
QACLKEFRMQNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007061 [H]

Pfam domain/function: PF04978 DUF664 [H]

EC number: NA

Molecular weight: Translated: 20134; Mature: 20003

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLKDLSPDEEMAPTVGLLFSAVNENIERLKSIVSGISREELEYKGEHGDKNSIAQLIY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHH
HLINVDVRWVYRLKESEIPRELEEKYGPMTDENGRLPEVTGVPLTVLIEWHEEVLEMLKH
HHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TAKGFSEKDLLKKVPYEGGFSTIRWGIWHMSDHNRYHQAHIQACLKEFRMQNS
HHCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PFLKDLSPDEEMAPTVGLLFSAVNENIERLKSIVSGISREELEYKGEHGDKNSIAQLIY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHH
HLINVDVRWVYRLKESEIPRELEEKYGPMTDENGRLPEVTGVPLTVLIEWHEEVLEMLKH
HHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TAKGFSEKDLLKKVPYEGGFSTIRWGIWHMSDHNRYHQAHIQACLKEFRMQNS
HHCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377 [H]