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The map label for this gene is lplC [H]

Identifier: 52785154

GI number: 52785154

Start: 1383660

End: 1384544

Strand: Direct

Name: lplC [H]

Synonym: BLi01386

Alternate gene names: 52785154

Gene position: 1383660-1384544 (Clockwise)

Preceding gene: 52785153

Following gene: 52785156

Centisome position: 32.77

GC content: 48.7

Gene sequence:

>885_bases
ATGTCCGGTGCGGAAACGATCCATAACACAAAAGCGGGCCGGGTGTTCGATTGGTTTAATGTGATCTTTCTCGGCTGCTG
CGGACTGATAACCGTCTTGCCTTTTCTGTATATTATCGCGGGGTCATTTGCGACGGAGGCCGAGCTGGCGGAAAGGAGCT
TCTTTATCTTTCCCGAGACGTTCTCGCTTGACGCGTACCGCTATATTTTTTCAACGCCGACATTTATCAGGAGCATGGGG
GTGTCTGTGCTTATAACGGTCGTGGGAACGATCGTCCAGCTCTTTTTTACATTTACGATGGCCTATCCTCTTGCAAAACG
GCACATCAAGGGAAGGAATCTGCTTTTGAATCTCGTCATTTTTGCGATGCTTTTCAGCGGAGGAATGATTCCGACGTATA
TCGTCGTCAAATCACTGGGACTGCTCGATTCCTATTGGGCGCTGATTTTGCCGATGGCGATCAACCCGTTCAATCTCATT
ATTATTAAAAACTTTTTTCAGCAGCTTCCGAAAGAGCTTGAGGAGTCGGCCAAGATTGACGGCTGTTCAGAAATCGGCGT
GTTCTTAAGGATCGCACTGCCGCTGTCTAAGCCGATTATTGCGACTTTTGCGCTGTTTTATGCGGTCGGCATTTGGAACG
ACTTTTTCCATGCTTTGCTGTACATCAATGACAGTGCGAAATGGCCGCTGCAAATGGTGCTGCGCCAAGTGACGATTCTT
TCGGATCTGACGGGGACGACGAATGATATGATGGAAACGGTGCCGCCTGAACAATCGATCAAACTGGCCGTCATCGTCAT
TGCGACGCTTCCGATTTTAGCCGTGTACCCGTTTTTGCAGAAGCATTTTGCCAAAGGCATTCTGATCGGGTCTGTGAAGG
GATAA

Upstream 100 bases:

>100_bases
TTTCAAATCGGTTGTCGGGATCATCCTGATATTCTGCGCCAACTATATCGCGAAAAAGTTTGACCAGGACGGTCTGTTTT
AATGAATGGAGGTGAAAGGG

Downstream 100 bases:

>100_bases
AAAAAAACCGCCGGGCTCATGTGCCGGCGGCTTCGGCTCAGGCAGCTGAGCCGTTTTTATTTCTTTTTTTCATCCAAAAA
TAAACCGGGAGACCGACGAG

Product: LplC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSGAETIHNTKAGRVFDWFNVIFLGCCGLITVLPFLYIIAGSFATEAELAERSFFIFPETFSLDAYRYIFSTPTFIRSMG
VSVLITVVGTIVQLFFTFTMAYPLAKRHIKGRNLLLNLVIFAMLFSGGMIPTYIVVKSLGLLDSYWALILPMAINPFNLI
IIKNFFQQLPKELEESAKIDGCSEIGVFLRIALPLSKPIIATFALFYAVGIWNDFFHALLYINDSAKWPLQMVLRQVTIL
SDLTGTTNDMMETVPPEQSIKLAVIVIATLPILAVYPFLQKHFAKGILIGSVKG

Sequences:

>Translated_294_residues
MSGAETIHNTKAGRVFDWFNVIFLGCCGLITVLPFLYIIAGSFATEAELAERSFFIFPETFSLDAYRYIFSTPTFIRSMG
VSVLITVVGTIVQLFFTFTMAYPLAKRHIKGRNLLLNLVIFAMLFSGGMIPTYIVVKSLGLLDSYWALILPMAINPFNLI
IIKNFFQQLPKELEESAKIDGCSEIGVFLRIALPLSKPIIATFALFYAVGIWNDFFHALLYINDSAKWPLQMVLRQVTIL
SDLTGTTNDMMETVPPEQSIKLAVIVIATLPILAVYPFLQKHFAKGILIGSVKG
>Mature_293_residues
SGAETIHNTKAGRVFDWFNVIFLGCCGLITVLPFLYIIAGSFATEAELAERSFFIFPETFSLDAYRYIFSTPTFIRSMGV
SVLITVVGTIVQLFFTFTMAYPLAKRHIKGRNLLLNLVIFAMLFSGGMIPTYIVVKSLGLLDSYWALILPMAINPFNLII
IKNFFQQLPKELEESAKIDGCSEIGVFLRIALPLSKPIIATFALFYAVGIWNDFFHALLYINDSAKWPLQMVLRQVTILS
DLTGTTNDMMETVPPEQSIKLAVIVIATLPILAVYPFLQKHFAKGILIGSVKG

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=25.9786476868327, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789860, Length=94, Percent_Identity=38.2978723404255, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32816; Mature: 32684

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
>Mature Secondary Structure 
SGAETIHNTKAGRVFDWFNVIFLGCCGLITVLPFLYIIAGSFATEAELAERSFFIFPET
CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEECCCC
FSLDAYRYIFSTPTFIRSMGVSVLITVVGTIVQLFFTFTMAYPLAKRHIKGRNLLLNLVI
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FAMLFSGGMIPTYIVVKSLGLLDSYWALILPMAINPFNLIIIKNFFQQLPKELEESAKID
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
GCSEIGVFLRIALPLSKPIIATFALFYAVGIWNDFFHALLYINDSAKWPLQMVLRQVTIL
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
SDLTGTTNDMMETVPPEQSIKLAVIVIATLPILAVYPFLQKHFAKGILIGSVKG
HHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]