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The map label for this gene is yesO [H]

Identifier: 52785136

GI number: 52785136

Start: 1360256

End: 1361557

Strand: Direct

Name: yesO [H]

Synonym: BLi01368

Alternate gene names: 52785136

Gene position: 1360256-1361557 (Clockwise)

Preceding gene: 52785135

Following gene: 52785137

Centisome position: 32.21

GC content: 49.16

Gene sequence:

>1302_bases
ATGTTGATGAGAAGATTTGTGTTTGTCTCTTTGTGCATTTTGCTGACGCTCGGCCTGTTCGGATGCAGTTCAAACACTGA
AGAGGCGGCCGGTGCGGACGGCAAAAAGAAGGTTACCTTAAGGGTCGCATGGTGGGGCGGACAGCCTCGGCATGATTATA
CATCAAAAATCATTGAGCTGTATGAAAAGGAACATCCGCATGTCAAAATCGAAGCGGAGTTTGCGAATTGGGACGATTAT
TGGAAAAAGCTTGCCCCGATGTCCGCGGCAGGGCAGCTGCCCGATGTGATTCAAATGGATATGGCGTATTTATCCCAATA
CGGCAAGAAAGGCCAGCTTGAAGATCTGACTCCGTATGTCAAAGACGGGACGATCAATACCGAATCGATTGATGAAAAGA
CGATCAAAGGCGGAAAAATCGGTGATCAGCTATACGGCTTCCCGCTCGGTGTGAATGTACTGTCGGTGATTACCAATGAC
GACTTGCTAAAAGAAGCGGGCGTCGAGATTGACGATGGCAGCTGGACGTGGACCGATTTTGAAAACCTGGCGCTAGAGGT
CGAAGAGAAGACGGGACAATACGGTTCAAACGGCATGCATCCGCCCGATGTCTTTTTCCCGTACTACCTCAGGACGAAGG
GCGAGCGCTTCTATAAAGAGGACGGCACAGGCCTTGCTTATTCAGACGACAAGCTGTTTGTCGATTACTTCAAGCGGCAG
GTGAAGCTCGTCGATGAAAAAGCTTCGCCGACGCCTGATGAAAGCGCGCAGGTGAAGGGGATGGAAGACGATTTTATCGT
CAAAGGCCGAACCGCTGCAACATGGAATTATTCAAATCAGTTTGCGGCGTTCGCGCAGCTTACCGATGCGCCCCTGTCAT
TAAAGCTGCCTCCTGAACAGGCGAAGGAAAAGGCGCTGTTTTTAAGGCCGAGCATGCTGTTTTCAATTCCGAAAAGCTCC
GAACAGAAAAAAGAAGCGGCTGCATTTATCGACTTCTTTATTAACAATGAAAAAGCCAATGCCCTGATCAAAGGAGAAAG
AGGCGTACCGGTCTCCTCCAAAATAGCGGAAACAGTGAAGTCAGAACTGAGCGAAGAGGAGAAAAAGATTTTCGAATATG
TCGAACGGGCTACGGAGTACGCGGGAGAAGCGGAACCGCCTGAGCCGATCAGCAGCGCCGAAGTCATCAAGCTGCTAAAA
GACACGTCAGACCAAATTTTGTTTAAAAAGATCACGCCTGAAGAAGGAGCCGCGAAGTTCAGAAAAGAAGCGGACGCCAT
ACTGAAAAGAAATCAACAATGA

Upstream 100 bases:

>100_bases
AATCTCTGTTTTTTTAACATTCTTCTCTGTTTTTTGAGTTTCTGGGACAGAAAGCTGAATTTAAAATGAAATGTAAGCAC
TTACAAATTGGGGAGGGGGA

Downstream 100 bases:

>100_bases
TAAGCGGGGCAAGTGAAGGAAGGCCGCTCATCAAATCCAGGAGGAAGTGAACGTGAAGCGAAAAAAAAGAATTGACAATT
TGGCGGGTTATGCCTTTATT

Product: YesO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MLMRRFVFVSLCILLTLGLFGCSSNTEEAAGADGKKKVTLRVAWWGGQPRHDYTSKIIELYEKEHPHVKIEAEFANWDDY
WKKLAPMSAAGQLPDVIQMDMAYLSQYGKKGQLEDLTPYVKDGTINTESIDEKTIKGGKIGDQLYGFPLGVNVLSVITND
DLLKEAGVEIDDGSWTWTDFENLALEVEEKTGQYGSNGMHPPDVFFPYYLRTKGERFYKEDGTGLAYSDDKLFVDYFKRQ
VKLVDEKASPTPDESAQVKGMEDDFIVKGRTAATWNYSNQFAAFAQLTDAPLSLKLPPEQAKEKALFLRPSMLFSIPKSS
EQKKEAAAFIDFFINNEKANALIKGERGVPVSSKIAETVKSELSEEEKKIFEYVERATEYAGEAEPPEPISSAEVIKLLK
DTSDQILFKKITPEEGAAKFRKEADAILKRNQQ

Sequences:

>Translated_433_residues
MLMRRFVFVSLCILLTLGLFGCSSNTEEAAGADGKKKVTLRVAWWGGQPRHDYTSKIIELYEKEHPHVKIEAEFANWDDY
WKKLAPMSAAGQLPDVIQMDMAYLSQYGKKGQLEDLTPYVKDGTINTESIDEKTIKGGKIGDQLYGFPLGVNVLSVITND
DLLKEAGVEIDDGSWTWTDFENLALEVEEKTGQYGSNGMHPPDVFFPYYLRTKGERFYKEDGTGLAYSDDKLFVDYFKRQ
VKLVDEKASPTPDESAQVKGMEDDFIVKGRTAATWNYSNQFAAFAQLTDAPLSLKLPPEQAKEKALFLRPSMLFSIPKSS
EQKKEAAAFIDFFINNEKANALIKGERGVPVSSKIAETVKSELSEEEKKIFEYVERATEYAGEAEPPEPISSAEVIKLLK
DTSDQILFKKITPEEGAAKFRKEADAILKRNQQ
>Mature_433_residues
MLMRRFVFVSLCILLTLGLFGCSSNTEEAAGADGKKKVTLRVAWWGGQPRHDYTSKIIELYEKEHPHVKIEAEFANWDDY
WKKLAPMSAAGQLPDVIQMDMAYLSQYGKKGQLEDLTPYVKDGTINTESIDEKTIKGGKIGDQLYGFPLGVNVLSVITND
DLLKEAGVEIDDGSWTWTDFENLALEVEEKTGQYGSNGMHPPDVFFPYYLRTKGERFYKEDGTGLAYSDDKLFVDYFKRQ
VKLVDEKASPTPDESAQVKGMEDDFIVKGRTAATWNYSNQFAAFAQLTDAPLSLKLPPEQAKEKALFLRPSMLFSIPKSS
EQKKEAAAFIDFFINNEKANALIKGERGVPVSSKIAETVKSELSEEEKKIFEYVERATEYAGEAEPPEPISSAEVIKLLK
DTSDQILFKKITPEEGAAKFRKEADAILKRNQQ

Specific function: May play role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48693; Mature: 48693

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMRRFVFVSLCILLTLGLFGCSSNTEEAAGADGKKKVTLRVAWWGGQPRHDYTSKIIEL
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHH
YEKEHPHVKIEAEFANWDDYWKKLAPMSAAGQLPDVIQMDMAYLSQYGKKGQLEDLTPYV
HHCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
KDGTINTESIDEKTIKGGKIGDQLYGFPLGVNVLSVITNDDLLKEAGVEIDDGSWTWTDF
CCCCCCCCCCCHHHCCCCCCCHHHCCCCCCHHHHHHHCCCHHHHHCCCEECCCCEEEECC
ENLALEVEEKTGQYGSNGMHPPDVFFPYYLRTKGERFYKEDGTGLAYSDDKLFVDYFKRQ
CCEEEEEEHHCCCCCCCCCCCCCCCCCHHHHCCCCHHHHCCCCEEEECCCHHHHHHHHHH
VKLVDEKASPTPDESAQVKGMEDDFIVKGRTAATWNYSNQFAAFAQLTDAPLSLKLPPEQ
HHHHHCCCCCCCCCCCEECCCCCCEEEECCEEEEECCCCHHHHHHHHCCCCEEEECCHHH
AKEKALFLRPSMLFSIPKSSEQKKEAAAFIDFFINNEKANALIKGERGVPVSSKIAETVK
HHCCEEEECCHHHEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHH
SELSEEEKKIFEYVERATEYAGEAEPPEPISSAEVIKLLKDTSDQILFKKITPEEGAAKF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHH
RKEADAILKRNQQ
HHHHHHHHHCCCC
>Mature Secondary Structure
MLMRRFVFVSLCILLTLGLFGCSSNTEEAAGADGKKKVTLRVAWWGGQPRHDYTSKIIEL
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHH
YEKEHPHVKIEAEFANWDDYWKKLAPMSAAGQLPDVIQMDMAYLSQYGKKGQLEDLTPYV
HHCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
KDGTINTESIDEKTIKGGKIGDQLYGFPLGVNVLSVITNDDLLKEAGVEIDDGSWTWTDF
CCCCCCCCCCCHHHCCCCCCCHHHCCCCCCHHHHHHHCCCHHHHHCCCEECCCCEEEECC
ENLALEVEEKTGQYGSNGMHPPDVFFPYYLRTKGERFYKEDGTGLAYSDDKLFVDYFKRQ
CCEEEEEEHHCCCCCCCCCCCCCCCCCHHHHCCCCHHHHCCCCEEEECCCHHHHHHHHHH
VKLVDEKASPTPDESAQVKGMEDDFIVKGRTAATWNYSNQFAAFAQLTDAPLSLKLPPEQ
HHHHHCCCCCCCCCCCEECCCCCCEEEECCEEEEECCCCHHHHHHHHCCCCEEEECCHHH
AKEKALFLRPSMLFSIPKSSEQKKEAAAFIDFFINNEKANALIKGERGVPVSSKIAETVK
HHCCEEEECCHHHEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHH
SELSEEEKKIFEYVERATEYAGEAEPPEPISSAEVIKLLKDTSDQILFKKITPEEGAAKF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHH
RKEADAILKRNQQ
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]