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The map label for this gene is xpaL2

Identifier: 52785120

GI number: 52785120

Start: 1343884

End: 1344147

Strand: Direct

Name: xpaL2

Synonym: BLi01352

Alternate gene names: 52785120

Gene position: 1343884-1344147 (Clockwise)

Preceding gene: 52785119

Following gene: 52785121

Centisome position: 31.83

GC content: 45.08

Gene sequence:

>264_bases
ATGAAACATATCGACAAAGGCACGGTCGTCAGGACGGTGCTTCTTTTTATTGCGCTGGTCAATCAGACGTTGATCATGTT
TGGAAAGCCGGTTTTGCCGGTCGCTGAAGATCAGATTCATACATTGGCGGATGCCCTGTATTCGGCCGGATCTGCGGCTT
TTACGATCGCTGCATCGCTCGTTGCCTGGTATAAGAACAACTATGTGACGAGCAAAGGGAAAATGCAAAAAGAAGTTTTA
CAGAAAAAAGGTTTAACGAAATAA

Upstream 100 bases:

>100_bases
GCATCACAGGCGCGATAATTACAGCGGTCAGCACCGGCATCATCGGCGGCGCGATCGCTGTTTTTTATAATTTATTGCAG
AAATAAGGGAGGACATCATC

Downstream 100 bases:

>100_bases
AGCTTCCTTTCAGACTTTCCAGAATTGAATTTGAAAAGGAATGATGAAGTTTGGTCAAAGTAATCAATAACTTTGTAAAA
GTCAATCAATACACCCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKHIDKGTVVRTVLLFIALVNQTLIMFGKPVLPVAEDQIHTLADALYSAGSAAFTIAASLVAWYKNNYVTSKGKMQKEVL
QKKGLTK

Sequences:

>Translated_87_residues
MKHIDKGTVVRTVLLFIALVNQTLIMFGKPVLPVAEDQIHTLADALYSAGSAAFTIAASLVAWYKNNYVTSKGKMQKEVL
QKKGLTK
>Mature_87_residues
MKHIDKGTVVRTVLLFIALVNQTLIMFGKPVLPVAEDQIHTLADALYSAGSAAFTIAASLVAWYKNNYVTSKGKMQKEVL
QKKGLTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SPP1 holin family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YAL2_BACLI (Q99165)

Other databases:

- EMBL:   M63942
- PIR:   C49754
- InterPro:   IPR006479
- ProDom:   PD008023
- TIGRFAMs:   TIGR01592

Pfam domain/function: PF04688 Phage_holin

EC number: NA

Molecular weight: Translated: 9535; Mature: 9535

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd41ba74)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIDKGTVVRTVLLFIALVNQTLIMFGKPVLPVAEDQIHTLADALYSAGSAAFTIAASL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
VAWYKNNYVTSKGKMQKEVLQKKGLTK
HHHHHCCCCCCCHHHHHHHHHHCCCCH
>Mature Secondary Structure
MKHIDKGTVVRTVLLFIALVNQTLIMFGKPVLPVAEDQIHTLADALYSAGSAAFTIAASL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
VAWYKNNYVTSKGKMQKEVLQKKGLTK
HHHHHCCCCCCCHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2033382