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The map label for this gene is xkdP [H]

Identifier: 52785110

GI number: 52785110

Start: 1336568

End: 1337224

Strand: Direct

Name: xkdP [H]

Synonym: BLi01342

Alternate gene names: 52785110

Gene position: 1336568-1337224 (Clockwise)

Preceding gene: 52785109

Following gene: 52785111

Centisome position: 31.65

GC content: 45.05

Gene sequence:

>657_bases
ATGACTAAATCCGTGTACGAATTTTGGCTGACGCAAGGAAAGGAAAAGCTGCGCCTCCCTGTGCTTCCAGAGCAGCTTGA
CGTCAGCAATAATCTTGCGAACGAATCTGTAAAGGTGTCAAAGTTCGGCGAGGTGACGTTTATCAATGAACCGGGAGCGA
AGACGATTTCATTTTCGTCTCATTTTCCGAAAAAGTATTCTCCGCTCTCGGAATACAAAGGGTTTCTTTCGCCGGAGAAC
GCGATTCTTAAAATCGAGAAATGGATGAAAGCAAAAAAACCGGTTCAATTTCTCGTGACGGGAACGAAGATCAATTTCAC
ATGCAGCATTGAAAACTTTTCGCATCGCGAGGGTGAAAAGGATATCGGCGACCGGGATTTTGATCTCACATTGAAAGAGT
ACCAAACAGCATCACCCCGGAAGATTAAACAAAAAAAGAAAACGAAGAAAAAACGGCCGTCCAAACTGGCTCCAAAAATG
TACACCGTCAAAAAAGGCGATACGCTCTGGCACATCGCAGGCCGTTTTTACGGAAACAGCCAGGAATGGCGGAAAATTTG
GAATGCGAACAAGCAGGCGATGATCAAACGAAGCAAGCGAAACATCAAACAGCCGGGACATTGGATTTTTCCGGGGCAAA
AGCTGAAAATACCATAA

Upstream 100 bases:

>100_bases
AGTGAGCGCGACCAGGAAACATTGATTGCGAAAATCAAGCGCGCTCTTGTCGATGAGCTTGAACGGGATATTCATATTGG
GACGAAAGGAAGCGTAGCTT

Downstream 100 bases:

>100_bases
AACGAAGCGCCGGATGAACCGGCGTTTTTCTGGTAAATCAAAAGCAGGGGATAGCGATGATCGAATTATTTGTCATAAAA
GAAAGCGAATGGTATGAACT

Product: XkdP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTKSVYEFWLTQGKEKLRLPVLPEQLDVSNNLANESVKVSKFGEVTFINEPGAKTISFSSHFPKKYSPLSEYKGFLSPEN
AILKIEKWMKAKKPVQFLVTGTKINFTCSIENFSHREGEKDIGDRDFDLTLKEYQTASPRKIKQKKKTKKKRPSKLAPKM
YTVKKGDTLWHIAGRFYGNSQEWRKIWNANKQAMIKRSKRNIKQPGHWIFPGQKLKIP

Sequences:

>Translated_218_residues
MTKSVYEFWLTQGKEKLRLPVLPEQLDVSNNLANESVKVSKFGEVTFINEPGAKTISFSSHFPKKYSPLSEYKGFLSPEN
AILKIEKWMKAKKPVQFLVTGTKINFTCSIENFSHREGEKDIGDRDFDLTLKEYQTASPRKIKQKKKTKKKRPSKLAPKM
YTVKKGDTLWHIAGRFYGNSQEWRKIWNANKQAMIKRSKRNIKQPGHWIFPGQKLKIP
>Mature_217_residues
TKSVYEFWLTQGKEKLRLPVLPEQLDVSNNLANESVKVSKFGEVTFINEPGAKTISFSSHFPKKYSPLSEYKGFLSPENA
ILKIEKWMKAKKPVQFLVTGTKINFTCSIENFSHREGEKDIGDRDFDLTLKEYQTASPRKIKQKKKTKKKRPSKLAPKMY
TVKKGDTLWHIAGRFYGNSQEWRKIWNANKQAMIKRSKRNIKQPGHWIFPGQKLKIP

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: 4340 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 25351; Mature: 25220

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSVYEFWLTQGKEKLRLPVLPEQLDVSNNLANESVKVSKFGEVTFINEPGAKTISFSS
CCCHHHHHHHHCCCCEEECCCCCHHHCCCCCCCCCCEEEEECCCEEEEECCCCCEEEECC
HFPKKYSPLSEYKGFLSPENAILKIEKWMKAKKPVQFLVTGTKINFTCSIENFSHREGEK
CCCCCCCCHHHHCCCCCCCHHEEHHHHHHHHCCCEEEEEECCEEEEEEEECCCCCCCCCC
DIGDRDFDLTLKEYQTASPRKIKQKKKTKKKRPSKLAPKMYTVKKGDTLWHIAGRFYGNS
CCCCCCCEEEHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEECCCCC
QEWRKIWNANKQAMIKRSKRNIKQPGHWIFPGQKLKIP
HHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCCEEECC
>Mature Secondary Structure 
TKSVYEFWLTQGKEKLRLPVLPEQLDVSNNLANESVKVSKFGEVTFINEPGAKTISFSS
CCHHHHHHHHCCCCEEECCCCCHHHCCCCCCCCCCEEEEECCCEEEEECCCCCEEEECC
HFPKKYSPLSEYKGFLSPENAILKIEKWMKAKKPVQFLVTGTKINFTCSIENFSHREGEK
CCCCCCCCHHHHCCCCCCCHHEEHHHHHHHHCCCEEEEEECCEEEEEEEECCCCCCCCCC
DIGDRDFDLTLKEYQTASPRKIKQKKKTKKKRPSKLAPKMYTVKKGDTLWHIAGRFYGNS
CCCCCCCEEEHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEECCCCC
QEWRKIWNANKQAMIKRSKRNIKQPGHWIFPGQKLKIP
HHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]