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The map label for this gene is xkdC [H]

Identifier: 52785090

GI number: 52785090

Start: 1320402

End: 1321202

Strand: Direct

Name: xkdC [H]

Synonym: BLi01322

Alternate gene names: 52785090

Gene position: 1320402-1321202 (Clockwise)

Preceding gene: 52785089

Following gene: 52785091

Centisome position: 31.27

GC content: 49.56

Gene sequence:

>801_bases
ATGCCCAAAAGAACAATCGAAGAGGTCATGGACGAACTGAGAAACAGGAGCCGTCAATCACAGGGGGGCAAACCGGAAGA
ATCCGCCGCAAAACGGTATGACTGTCCGAAGTGCAAAGATGAACTCGGATTTATCGAACGGCGCGGAACGATGGAAGTAT
GGGTATCATGCGTCTGCCGCGAATGGCGCAAAGCGCAAAAGCTGTTGAAGACGAGCGAAATCACCGAACAATTTAAAAAC
TTAAACTTTGCTCAATTCAAGACGGAAGGAAAGCATCAATCTGTAAAAGAGGCGTATGAATGCGCCGTTGAATATGTACA
AGCTTACCGGGACATTCAGGAAAGCCGCAGAAACAGCATCGCGCTCTTGGGACGACCCGGTTCAGGGAAGACTCATTTGC
TGACGGCTGCCGCCAATGAGCTGATGAGGAAGCTTTTTGTACCCGTCCTGTATTTTCCGTTTGTCGAAGGATTCAATGAT
TTAAAACAGGACTTTTCGTTGCTTGAGAATAAGCTGAACCGGATGAAGCAAGTCGAGGTGCTGTTTCTTGATGACCTGTT
TAAGCCGGTGGCAGGCAGGCCGCGGGCAACGGAATGGCAGATCGAACAGACATATGCCGTCGTCAATTACAGGTATTTGA
ACCATAAGCCGATCATGCTGTCCAGCGAGCTAAGCGTTGAAGAAATTGTCAGCATAGACGAAGCGCTCGGAACGAGGCTG
GTCGAAATGTGCGGGGACTTTCTCGTCGTCCTGAACGGGAGCTCTTTCGGCATCAATCATAGACTGGAGGGGATGGTTTG
A

Upstream 100 bases:

>100_bases
CATGAAACGATCAAGGTCTTCAGCTACTGTGAAAAATATATCATCGGCCGGCTGGCTGAAGCGGAAGCGAAAACGAAAAC
AACTGTCAGGAGGGAGAACA

Downstream 100 bases:

>100_bases
TGTGCCGGCTATGTAATGGGAGAAAATCAATCCATCAGGACGCAAGGGTCGGAACGATTTTCCGCGCTTGCCCGAACTGC
TGCACTGAAAGCGGCGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MPKRTIEEVMDELRNRSRQSQGGKPEESAAKRYDCPKCKDELGFIERRGTMEVWVSCVCREWRKAQKLLKTSEITEQFKN
LNFAQFKTEGKHQSVKEAYECAVEYVQAYRDIQESRRNSIALLGRPGSGKTHLLTAAANELMRKLFVPVLYFPFVEGFND
LKQDFSLLENKLNRMKQVEVLFLDDLFKPVAGRPRATEWQIEQTYAVVNYRYLNHKPIMLSSELSVEEIVSIDEALGTRL
VEMCGDFLVVLNGSSFGINHRLEGMV

Sequences:

>Translated_266_residues
MPKRTIEEVMDELRNRSRQSQGGKPEESAAKRYDCPKCKDELGFIERRGTMEVWVSCVCREWRKAQKLLKTSEITEQFKN
LNFAQFKTEGKHQSVKEAYECAVEYVQAYRDIQESRRNSIALLGRPGSGKTHLLTAAANELMRKLFVPVLYFPFVEGFND
LKQDFSLLENKLNRMKQVEVLFLDDLFKPVAGRPRATEWQIEQTYAVVNYRYLNHKPIMLSSELSVEEIVSIDEALGTRL
VEMCGDFLVVLNGSSFGINHRLEGMV
>Mature_265_residues
PKRTIEEVMDELRNRSRQSQGGKPEESAAKRYDCPKCKDELGFIERRGTMEVWVSCVCREWRKAQKLLKTSEITEQFKNL
NFAQFKTEGKHQSVKEAYECAVEYVQAYRDIQESRRNSIALLGRPGSGKTHLLTAAANELMRKLFVPVLYFPFVEGFNDL
KQDFSLLENKLNRMKQVEVLFLDDLFKPVAGRPRATEWQIEQTYAVVNYRYLNHKPIMLSSELSVEEIVSIDEALGTRLV
EMCGDFLVVLNGSSFGINHRLEGMV

Specific function: May function as a transcriptional antiterminator [H]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaM [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 30714; Mature: 30582

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRTIEEVMDELRNRSRQSQGGKPEESAAKRYDCPKCKDELGFIERRGTMEVWVSCVCR
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
EWRKAQKLLKTSEITEQFKNLNFAQFKTEGKHQSVKEAYECAVEYVQAYRDIQESRRNSI
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
ALLGRPGSGKTHLLTAAANELMRKLFVPVLYFPFVEGFNDLKQDFSLLENKLNRMKQVEV
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLDDLFKPVAGRPRATEWQIEQTYAVVNYRYLNHKPIMLSSELSVEEIVSIDEALGTRL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEEECCCCEEEECCCCHHHHHHHHHHHHHHH
VEMCGDFLVVLNGSSFGINHRLEGMV
HHHHCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKRTIEEVMDELRNRSRQSQGGKPEESAAKRYDCPKCKDELGFIERRGTMEVWVSCVCR
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
EWRKAQKLLKTSEITEQFKNLNFAQFKTEGKHQSVKEAYECAVEYVQAYRDIQESRRNSI
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
ALLGRPGSGKTHLLTAAANELMRKLFVPVLYFPFVEGFNDLKQDFSLLENKLNRMKQVEV
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLDDLFKPVAGRPRATEWQIEQTYAVVNYRYLNHKPIMLSSELSVEEIVSIDEALGTRL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEEECCCCEEEECCCCHHHHHHHHHHHHHHH
VEMCGDFLVVLNGSSFGINHRLEGMV
HHHHCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083174; 9384377 [H]