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The map label for this gene is amyC [H]

Identifier: 52784914

GI number: 52784914

Start: 1148155

End: 1148985

Strand: Direct

Name: amyC [H]

Synonym: BLi01142

Alternate gene names: 52784914

Gene position: 1148155-1148985 (Clockwise)

Preceding gene: 52784913

Following gene: 52784915

Centisome position: 27.19

GC content: 47.41

Gene sequence:

>831_bases
ATGAATCGCCAAGAGAAAAAGAAACGGGCGCTGTGGACTTTGCTGGCTGCATGGATTACCGTTTTTCACCTGATTCCGTT
TTATATTTTGCTGACGACGGCGCTGAAAGCAAAGGGAGATTTCAGTTCAAAATGGAAGTTCCCGGACGAAATCAGCCTCG
GTAATTTTGCAGAAGCATGGGATAAAGCAGGTCTGGCCGGCTCGTTTTTCAATACTGCTGTGATCACTTTTGCTTCGGCG
GCTCTGCTCATTGTGATCGGCTCTCTGGCGGCATATCCGCTCGCCAGGCGCAGAACAAAGCTCAATCAAGCCGTTTACTT
CCTGTTTATCGGCATTATGATCATTCCGCCGCTGACATCCATGGTTCCTTTATACAAAATGGTGGTGGAGCTTGGCATGC
TGAATACGCTTGAAATCGCGATATTGAATAATACGGCGGCTTATATGCCCTTGACGATTTTTTTGTATGCCGGATTTATC
CGGTCGACGATTCCGAAAGAGCTTGAAGAGGCTGCGAGAATCGACGGGGCGAGCACGGCGGGGATTTTCTTCAGAATCGT
CTTTCCTTTATTAAAGCCGGTGACTGCGACGATTTGCATTATTGCCTGCGTATTCATCTGGAACGACTATCAGTTTTCGA
TCTTTTTCCTTCAAGACAAAAGTGTGCAGACTTTGACTGTAGCGATTGCCGGCTTCTTTGGGCAAAATGCGAACAACCTG
CACTTGGTGGCCGCGGCTTCGCTGATGGCGATGCTGCCGATGACGATTCTATTTTTATTCCTGCAAAAGTACTTTATAAA
AGGATTATCAGCAGGAGCGCTAAAAGGCTAG

Upstream 100 bases:

>100_bases
CGGCTATGCAGCCGCTCAGGGGGTTTTCATGGCGGTGTTGATACTGCTAATCAGCTTTACGGCTCTCATCTATTTTAAGC
GCAAGGAGGTCGAAGCCTAG

Downstream 100 bases:

>100_bases
CGAAAATTTCACGGGGAAAGGAAGATATGAATGACTAAAATTGCTTTTATCGGAGCTGGAAGCACAATTTTTGCGAAAAA
TGTGCTGGGGGACTGTCTGA

Product: AmyC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNRQEKKKRALWTLLAAWITVFHLIPFYILLTTALKAKGDFSSKWKFPDEISLGNFAEAWDKAGLAGSFFNTAVITFASA
ALLIVIGSLAAYPLARRRTKLNQAVYFLFIGIMIIPPLTSMVPLYKMVVELGMLNTLEIAILNNTAAYMPLTIFLYAGFI
RSTIPKELEEAARIDGASTAGIFFRIVFPLLKPVTATICIIACVFIWNDYQFSIFFLQDKSVQTLTVAIAGFFGQNANNL
HLVAAASLMAMLPMTILFLFLQKYFIKGLSAGALKG

Sequences:

>Translated_276_residues
MNRQEKKKRALWTLLAAWITVFHLIPFYILLTTALKAKGDFSSKWKFPDEISLGNFAEAWDKAGLAGSFFNTAVITFASA
ALLIVIGSLAAYPLARRRTKLNQAVYFLFIGIMIIPPLTSMVPLYKMVVELGMLNTLEIAILNNTAAYMPLTIFLYAGFI
RSTIPKELEEAARIDGASTAGIFFRIVFPLLKPVTATICIIACVFIWNDYQFSIFFLQDKSVQTLTVAIAGFFGQNANNL
HLVAAASLMAMLPMTILFLFLQKYFIKGLSAGALKG
>Mature_276_residues
MNRQEKKKRALWTLLAAWITVFHLIPFYILLTTALKAKGDFSSKWKFPDEISLGNFAEAWDKAGLAGSFFNTAVITFASA
ALLIVIGSLAAYPLARRRTKLNQAVYFLFIGIMIIPPLTSMVPLYKMVVELGMLNTLEIAILNNTAAYMPLTIFLYAGFI
RSTIPKELEEAARIDGASTAGIFFRIVFPLLKPVTATICIIACVFIWNDYQFSIFFLQDKSVQTLTVAIAGFFGQNANNL
HLVAAASLMAMLPMTILFLFLQKYFIKGLSAGALKG

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=285, Percent_Identity=28.0701754385965, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789860, Length=204, Percent_Identity=27.9411764705882, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790464, Length=279, Percent_Identity=25.4480286738351, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30590; Mature: 30590

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQEKKKRALWTLLAAWITVFHLIPFYILLTTALKAKGDFSSKWKFPDEISLGNFAEAW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
DKAGLAGSFFNTAVITFASAALLIVIGSLAAYPLARRRTKLNQAVYFLFIGIMIIPPLTS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
MVPLYKMVVELGMLNTLEIAILNNTAAYMPLTIFLYAGFIRSTIPKELEEAARIDGASTA
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
GIFFRIVFPLLKPVTATICIIACVFIWNDYQFSIFFLQDKSVQTLTVAIAGFFGQNANNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCC
HLVAAASLMAMLPMTILFLFLQKYFIKGLSAGALKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNRQEKKKRALWTLLAAWITVFHLIPFYILLTTALKAKGDFSSKWKFPDEISLGNFAEAW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
DKAGLAGSFFNTAVITFASAALLIVIGSLAAYPLARRRTKLNQAVYFLFIGIMIIPPLTS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
MVPLYKMVVELGMLNTLEIAILNNTAAYMPLTIFLYAGFIRSTIPKELEEAARIDGASTA
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
GIFFRIVFPLLKPVTATICIIACVFIWNDYQFSIFFLQDKSVQTLTVAIAGFFGQNANNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCC
HLVAAASLMAMLPMTILFLFLQKYFIKGLSAGALKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]