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The map label for this gene is ylbA [H]

Identifier: 52784900

GI number: 52784900

Start: 1131519

End: 1132328

Strand: Direct

Name: ylbA [H]

Synonym: BLi01128

Alternate gene names: 52784900

Gene position: 1131519-1132328 (Clockwise)

Preceding gene: 52784899

Following gene: 52784901

Centisome position: 26.8

GC content: 37.16

Gene sequence:

>810_bases
ATGAAAAGGAGCCAGATACTCATGAGTTACTTAAATCATAATCAAGGATACAGAGAAGGTTTATTAGAAACACGTTCAGT
AATAAAAAAGGATAATTATGCGGTAATCACACCTGATGGCTTGGTTAATAATGTTGTACCTGGCTTTGAAGATTGTGATG
TAACGATTTTAGGATCCCCGCGTTTAGGTGCAAGGTTTGTAGATTATTTGGTAACAGTTAAAAACAAGGGCGGAAACAAA
ACAGGTTTTGCCGGTGATGGTATCCAATCATTTGTGTACGTTGAATATGGTAAAATCAACGCTTTTGCGGATGGTGAAAA
ATACGAATTAGCAAAAGGCGGATTCTTATATGTGCCTCCACACTTACAATTGACATTTGAAAATAATAATAATGGTGAGG
ACAGCCGTTTGTTTTTATACAAAAAGCGCTATCAGCCGCTTGAAGGACATACACCAGAAATCGTTGCAGGTAATGTGAAT
AACATTAAACAAGAAGCCTATGAAGGTATGAAAGAAGTATTAATTCAAGATTTACTGCCAAAAGAAATCGCATATGACAT
GAACATTCATATTCTTTCATTCGAGCCAGGTGCTTCGCATGGTTACATTGAAACGCACGTTCAAGAACACGGTGCCTATA
TATTAAGTGGACGAGGTGTTTACAACTTGGACAACGAGTGGATGCCAGTTGACAAAGGTGACTATATTTTTATGGGAGCT
TATACGCCGCAAGCAACCTATGCAATTGGTTTGGATGAACCATTCTCGTATATTTATTCTAAGGATGCGAATAGAGATAT
TAATCTATAA

Upstream 100 bases:

>100_bases
TTAGCCACAATACCAATGAAGAAACGAAGATAGAAGACCTTGTGAAGGGGATTGAAGTATTGAAAGATGTATTGTTTGAA
CTAGCTTATAAGGAATAATA

Downstream 100 bases:

>100_bases
AGAGGGGCAATTTTAATGAGTGAACCATTAGTGTATGTAGAACGTAATCGTCTCCGGCAGCTAATGAAAGATAAATTAGT
GAAAGCAGGTTTACCTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKRSQILMSYLNHNQGYREGLLETRSVIKKDNYAVITPDGLVNNVVPGFEDCDVTILGSPRLGARFVDYLVTVKNKGGNK
TGFAGDGIQSFVYVEYGKINAFADGEKYELAKGGFLYVPPHLQLTFENNNNGEDSRLFLYKKRYQPLEGHTPEIVAGNVN
NIKQEAYEGMKEVLIQDLLPKEIAYDMNIHILSFEPGASHGYIETHVQEHGAYILSGRGVYNLDNEWMPVDKGDYIFMGA
YTPQATYAIGLDEPFSYIYSKDANRDINL

Sequences:

>Translated_269_residues
MKRSQILMSYLNHNQGYREGLLETRSVIKKDNYAVITPDGLVNNVVPGFEDCDVTILGSPRLGARFVDYLVTVKNKGGNK
TGFAGDGIQSFVYVEYGKINAFADGEKYELAKGGFLYVPPHLQLTFENNNNGEDSRLFLYKKRYQPLEGHTPEIVAGNVN
NIKQEAYEGMKEVLIQDLLPKEIAYDMNIHILSFEPGASHGYIETHVQEHGAYILSGRGVYNLDNEWMPVDKGDYIFMGA
YTPQATYAIGLDEPFSYIYSKDANRDINL
>Mature_269_residues
MKRSQILMSYLNHNQGYREGLLETRSVIKKDNYAVITPDGLVNNVVPGFEDCDVTILGSPRLGARFVDYLVTVKNKGGNK
TGFAGDGIQSFVYVEYGKINAFADGEKYELAKGGFLYVPPHLQLTFENNNNGEDSRLFLYKKRYQPLEGHTPEIVAGNVN
NIKQEAYEGMKEVLIQDLLPKEIAYDMNIHILSFEPGASHGYIETHVQEHGAYILSGRGVYNLDNEWMPVDKGDYIFMGA
YTPQATYAIGLDEPFSYIYSKDANRDINL

Specific function: Unknown

COG id: COG3257

COG function: function code R; Uncharacterized protein, possibly involved in glyoxylate utilization

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786725, Length=262, Percent_Identity=60.6870229007634, Blast_Score=326, Evalue=1e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017627
- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR008579
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF05899 Cupin_3 [H]

EC number: NA

Molecular weight: Translated: 30288; Mature: 30288

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSQILMSYLNHNQGYREGLLETRSVIKKDNYAVITPDGLVNNVVPGFEDCDVTILGSP
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCCEEEEECC
RLGARFVDYLVTVKNKGGNKTGFAGDGIQSFVYVEYGKINAFADGEKYELAKGGFLYVPP
CCHHHHEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCCEEEEECCCEEEECC
HLQLTFENNNNGEDSRLFLYKKRYQPLEGHTPEIVAGNVNNIKQEAYEGMKEVLIQDLLP
EEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCH
KEIAYDMNIHILSFEPGASHGYIETHVQEHGAYILSGRGVYNLDNEWMPVDKGDYIFMGA
HHHEECCEEEEEEECCCCCCCEEEEEEHHCCCEEEECCEEEECCCCEECCCCCCEEEEEE
YTPQATYAIGLDEPFSYIYSKDANRDINL
CCCCCEEEEECCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKRSQILMSYLNHNQGYREGLLETRSVIKKDNYAVITPDGLVNNVVPGFEDCDVTILGSP
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCCEEEEECC
RLGARFVDYLVTVKNKGGNKTGFAGDGIQSFVYVEYGKINAFADGEKYELAKGGFLYVPP
CCHHHHEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCCEEEEECCCEEEECC
HLQLTFENNNNGEDSRLFLYKKRYQPLEGHTPEIVAGNVNNIKQEAYEGMKEVLIQDLLP
EEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCH
KEIAYDMNIHILSFEPGASHGYIETHVQEHGAYILSGRGVYNLDNEWMPVDKGDYIFMGA
HHHEECCEEEEEEECCCCCCCEEEEEEHHCCCEEEECCEEEECCCCEECCCCCCEEEEEE
YTPQATYAIGLDEPFSYIYSKDANRDINL
CCCCCEEEEECCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]