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The map label for this gene is yhgC [H]

Identifier: 52784862

GI number: 52784862

Start: 1088081

End: 1088584

Strand: Reverse

Name: yhgC [H]

Synonym: BLi01090

Alternate gene names: 52784862

Gene position: 1088584-1088081 (Counterclockwise)

Preceding gene: 52784869

Following gene: 52784861

Centisome position: 25.78

GC content: 45.24

Gene sequence:

>504_bases
TTGAATTTTTACATTACATACGGAACTGTCGATTTTTTAAAAAAGCTCGCCAAACAGCACGGTCTTGAAAACATGTTATT
TATGAAAAGCCACGATTCCGCCATTCTCTTTCACGAAACCGACGGAGAAAGCGTCTTTCATTCTCCTCACCGCTACGAAA
TCATCGATCAGTCGGGATCTTTGGAACATTCCGGATTCACCGTCCTCAACAACATCCCTGTCACACCGGAAGGAAGGCCG
CTTTTCGAAGCCCGTTTTAAAAACAGAGCCGGAAAAATCGAAAATCAGCCCGGCTTTAAAGCCCTCAGGGTGCTGAGGCC
GAAAGACAGCGATACGTATATCGTATTGACACTGTGGGACAGAGAACAGTCATTTCAAGACTGGAAAAACTCCAAGTCGT
TCAGCGAAGCCCACCAAAAGAAGGAATCTTCCGCAGGAATCAACCAAGGCGGAACGATTTTTTCCCGCCCATCCTATATT
TCTTCGTATCATTCTGTCGAATAA

Upstream 100 bases:

>100_bases
GGGAATTTTTTCTTCAAATTATGTTGCAGCATTTATAGCGGGTAATGGATAGAATTTTAAATCGTCCTTTTGTTATACTA
TCAAAAAAGGGGTGATAAAA

Downstream 100 bases:

>100_bases
CTGCCTTTTAGGCAGTTTTTTTATTTCCGAGGAAATGAGCCCTTCCTTCACACTCTGACAGCCCAGGAATACGCTGTATG
AGGTTATGTTTAAAGGGGGG

Product: YhgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNFYITYGTVDFLKKLAKQHGLENMLFMKSHDSAILFHETDGESVFHSPHRYEIIDQSGSLEHSGFTVLNNIPVTPEGRP
LFEARFKNRAGKIENQPGFKALRVLRPKDSDTYIVLTLWDREQSFQDWKNSKSFSEAHQKKESSAGINQGGTIFSRPSYI
SSYHSVE

Sequences:

>Translated_167_residues
MNFYITYGTVDFLKKLAKQHGLENMLFMKSHDSAILFHETDGESVFHSPHRYEIIDQSGSLEHSGFTVLNNIPVTPEGRP
LFEARFKNRAGKIENQPGFKALRVLRPKDSDTYIVLTLWDREQSFQDWKNSKSFSEAHQKKESSAGINQGGTIFSRPSYI
SSYHSVE
>Mature_167_residues
MNFYITYGTVDFLKKLAKQHGLENMLFMKSHDSAILFHETDGESVFHSPHRYEIIDQSGSLEHSGFTVLNNIPVTPEGRP
LFEARFKNRAGKIENQPGFKALRVLRPKDSDTYIVLTLWDREQSFQDWKNSKSFSEAHQKKESSAGINQGGTIFSRPSYI
SSYHSVE

Specific function: Unknown

COG id: COG2329

COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 19146; Mature: 19146

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFYITYGTVDFLKKLAKQHGLENMLFMKSHDSAILFHETDGESVFHSPHRYEIIDQSGS
CEEEEEECHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEECCCCC
LEHSGFTVLNNIPVTPEGRPLFEARFKNRAGKIENQPGFKALRVLRPKDSDTYIVLTLWD
CCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCCEEEEEEEC
REQSFQDWKNSKSFSEAHQKKESSAGINQGGTIFSRPSYISSYHSVE
CCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCC
>Mature Secondary Structure
MNFYITYGTVDFLKKLAKQHGLENMLFMKSHDSAILFHETDGESVFHSPHRYEIIDQSGS
CEEEEEECHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEECCCCC
LEHSGFTVLNNIPVTPEGRPLFEARFKNRAGKIENQPGFKALRVLRPKDSDTYIVLTLWD
CCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCCEEEEEEEC
REQSFQDWKNSKSFSEAHQKKESSAGINQGGTIFSRPSYISSYHSVE
CCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335642; 9579061; 9384377 [H]