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The map label for this gene is yaaJ [C]

Identifier: 52784616

GI number: 52784616

Start: 837574

End: 838932

Strand: Reverse

Name: yaaJ [C]

Synonym: BLi00817

Alternate gene names: 52784616

Gene position: 838932-837574 (Counterclockwise)

Preceding gene: 52784620

Following gene: 52784615

Centisome position: 19.87

GC content: 50.18

Gene sequence:

>1359_bases
ATGGAATTTATTTCACATATTGTAGATACAATGAACGGTTTTTTATGGGGGCCTCCGCTTTTGATTCTCATTGTTGGAAC
AGGGATTTATTTGACTTTCAGGCTGGCTTTTTTGCAGGTCAGACTTTTGCCTTACTCTTTAAAGCTCGCCTTTTCAAGGC
ATCAGGATAAATCCTCCGAAGGCGATATTTCCCACTTTCAGGCGCTGATGACCGCCCTTGCCGCTACGGTCGGCACAGGG
AATATCGTCGGCGTCGCCTCAGCTGTTATTGCCGGCGGGCCGGGCGCCGTATTTTGGATGTGGCTCGCCGCCTTCTTCGG
AATGGCGACGAAATATGCTGAAGCGGTGCTTGCTGTCAGATTCCGCGTGAAAGATAAAAACGGCGAAATGTCAGGCGGTC
CGATGTATTATTTGGAACACGGCCTCAAGCAAAAGTGGCTTGGCGTGTTATTTGCCATATTCGGGGCGCTTGCCGCTTTT
GGAATAGGCAATATGGTTCAGTCAAATTCTGTATCCGGAGTCATGAGCTCCACTTTTTCCGTTCCTGCCTGGGTAACCGG
CATTATTGTCACGACTTTTACCGCCCTTGTCATTCTCGGGGGAATTAAAAGCATCGGCAGAGTCACCTCGCTGTTCGTGC
CGGTCATGGCTTTATTTTATGTCATCGCCGGATTGATCATTCTTGTCACAAACTTTGAACTTGTCCCCGGCGCTGTCGGT
TTAATTTTCTCTGACGCGTTTACCGGGCAAGCCGTGGCAGGAGGCGCGATCGGAACCGTGATCCGCTGGGGCGTAGCGCG
GGGCGTATTTTCAAATGAAGCAGGTCTCGGCTCGGCGCCGATCGCCGCAGCCGCGGCAAAAACCGATATGCCGGCCCGCC
AGGCGCTTGTCTCTATGACCCAGGTTTTCATCGACACATTGATTGTCTGTTCGATTACGGGGATATCAATTGTCATGGGA
AATATGTATCTGACAGAAAAAACCGATGCCCTGACATCGATGACATTCGCACACTTTCTTGGTCCTGCGGGATCGACAAT
CGTCGCGATCGGACTGCTGCTGTTCGCCTACTCGACGATTTTGGGCTGGTCGTACTACGGAGAAAAATGCTTCACCTACC
TGCTGAATGAAAAATATGCGATCGTCTATCGTATCATCTTTGTGATCGCCGTCTTTTTCGGAGCGGTCTTTAAAAATGAC
TTCGTCTGGGCGCTTGCCGATATGCTGAACGGCCTGATGGCAATTCCGAACCTGATCGGCCTGCTCGGTTTGACAGGCAT
TGTCGTCTATGAATCCAAACAGATCCTCGCCAAAATCAAAGCCGAAAAAGAAGAAAAGCAAAACAGCGTATCTGTTTAA

Upstream 100 bases:

>100_bases
TTTCAACTTTGGGAAGAAAAGATGACAATGCTATTGACAAATCTAACAAACTTTCAGAATATTCTAGTTAGACACAAAAT
TAAAGGGGGATATTTCGCCT

Downstream 100 bases:

>100_bases
GCCAAATGCTTTTTGACAGCCGTCCTTTTCTTCTCGCTTAATTCTGTTACAATAAAGACTACGAAATCAGTGAGAAAGGA
TGTGCCTTCTTGTCAGATCA

Product: hypothetical protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MEFISHIVDTMNGFLWGPPLLILIVGTGIYLTFRLAFLQVRLLPYSLKLAFSRHQDKSSEGDISHFQALMTALAATVGTG
NIVGVASAVIAGGPGAVFWMWLAAFFGMATKYAEAVLAVRFRVKDKNGEMSGGPMYYLEHGLKQKWLGVLFAIFGALAAF
GIGNMVQSNSVSGVMSSTFSVPAWVTGIIVTTFTALVILGGIKSIGRVTSLFVPVMALFYVIAGLIILVTNFELVPGAVG
LIFSDAFTGQAVAGGAIGTVIRWGVARGVFSNEAGLGSAPIAAAAAKTDMPARQALVSMTQVFIDTLIVCSITGISIVMG
NMYLTEKTDALTSMTFAHFLGPAGSTIVAIGLLLFAYSTILGWSYYGEKCFTYLLNEKYAIVYRIIFVIAVFFGAVFKND
FVWALADMLNGLMAIPNLIGLLGLTGIVVYESKQILAKIKAEKEEKQNSVSV

Sequences:

>Translated_452_residues
MEFISHIVDTMNGFLWGPPLLILIVGTGIYLTFRLAFLQVRLLPYSLKLAFSRHQDKSSEGDISHFQALMTALAATVGTG
NIVGVASAVIAGGPGAVFWMWLAAFFGMATKYAEAVLAVRFRVKDKNGEMSGGPMYYLEHGLKQKWLGVLFAIFGALAAF
GIGNMVQSNSVSGVMSSTFSVPAWVTGIIVTTFTALVILGGIKSIGRVTSLFVPVMALFYVIAGLIILVTNFELVPGAVG
LIFSDAFTGQAVAGGAIGTVIRWGVARGVFSNEAGLGSAPIAAAAAKTDMPARQALVSMTQVFIDTLIVCSITGISIVMG
NMYLTEKTDALTSMTFAHFLGPAGSTIVAIGLLLFAYSTILGWSYYGEKCFTYLLNEKYAIVYRIIFVIAVFFGAVFKND
FVWALADMLNGLMAIPNLIGLLGLTGIVVYESKQILAKIKAEKEEKQNSVSV
>Mature_452_residues
MEFISHIVDTMNGFLWGPPLLILIVGTGIYLTFRLAFLQVRLLPYSLKLAFSRHQDKSSEGDISHFQALMTALAATVGTG
NIVGVASAVIAGGPGAVFWMWLAAFFGMATKYAEAVLAVRFRVKDKNGEMSGGPMYYLEHGLKQKWLGVLFAIFGALAAF
GIGNMVQSNSVSGVMSSTFSVPAWVTGIIVTTFTALVILGGIKSIGRVTSLFVPVMALFYVIAGLIILVTNFELVPGAVG
LIFSDAFTGQAVAGGAIGTVIRWGVARGVFSNEAGLGSAPIAAAAAKTDMPARQALVSMTQVFIDTLIVCSITGISIVMG
NMYLTEKTDALTSMTFAHFLGPAGSTIVAIGLLLFAYSTILGWSYYGEKCFTYLLNEKYAIVYRIIFVIAVFFGAVFKND
FVWALADMLNGLMAIPNLIGLLGLTGIVVYESKQILAKIKAEKEEKQNSVSV

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=442, Percent_Identity=39.3665158371041, Blast_Score=262, Evalue=4e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48233; Mature: 48233

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFISHIVDTMNGFLWGPPLLILIVGTGIYLTFRLAFLQVRLLPYSLKLAFSRHQDKSSE
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GDISHFQALMTALAATVGTGNIVGVASAVIAGGPGAVFWMWLAAFFGMATKYAEAVLAVR
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FRVKDKNGEMSGGPMYYLEHGLKQKWLGVLFAIFGALAAFGIGNMVQSNSVSGVMSSTFS
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
VPAWVTGIIVTTFTALVILGGIKSIGRVTSLFVPVMALFYVIAGLIILVTNFELVPGAVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHH
LIFSDAFTGQAVAGGAIGTVIRWGVARGVFSNEAGLGSAPIAAAAAKTDMPARQALVSMT
HHHHCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
QVFIDTLIVCSITGISIVMGNMYLTEKTDALTSMTFAHFLGPAGSTIVAIGLLLFAYSTI
HHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGWSYYGEKCFTYLLNEKYAIVYRIIFVIAVFFGAVFKNDFVWALADMLNGLMAIPNLIG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLGLTGIVVYESKQILAKIKAEKEEKQNSVSV
HHHHHHHEEECCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHEEECCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]