Click here to switch to the map view.

The map label for this gene is ydjM [H]

Identifier: 52784472

GI number: 52784472

Start: 674587

End: 674967

Strand: Direct

Name: ydjM [H]

Synonym: BLi00670

Alternate gene names: 52784472

Gene position: 674587-674967 (Clockwise)

Preceding gene: 52784467

Following gene: 52784473

Centisome position: 15.98

GC content: 44.09

Gene sequence:

>381_bases
ATGAAGAAGATACTTTTTTCTGTTTTTGTTTTGGCAGGCAGCTTGCTATTGGCTTTTAATTTTGCCGGTGAAGCGAGTGC
TAAAACGAAAAAAGTCAGCGGCTATATCACTTGGTACAACGGAGTGGGCAAAATCGGCGCTGACGGCAAGAGGCTCGGCC
ATTGGGACTGCGCCACAAAGATGGGCTTCGATGTTCCGAGAAAAGGCACAAAAATAAGAGCCTATTCAAAAGCAAAACCG
CACAAAGTCATTACAGTCTATAAATATGATGTCGGCAGAATGCCGGGCGCTGTTTTGGATGTAAGCCCGAAAGCTTTTAG
AGCTTTGGGATTTCCGACAAGCAAAGGAAAGGTAGCCGGACATTATACATATAAAAAATAG

Upstream 100 bases:

>100_bases
TTGCATTTTAAACGTAAACAAACTGTAAAATACCATTTCTATGAAAAAAGGTATAATTTGAATGTCAGAAAAAAATCCCA
TTCACGGAGGATATTTTTAT

Downstream 100 bases:

>100_bases
GAGAAATGAAGCAAGAAAAATCGTTTTCTTGCTTCTTTCAATTGGCGGGGTCGAATATGAAAAAAGTTTCAGTTGTTTTG
TTGGCGGCAGTCATTTTAGC

Product: YdjM

Products: NA

Alternate protein names: PSPA13 [H]

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKKILFSVFVLAGSLLLAFNFAGEASAKTKKVSGYITWYNGVGKIGADGKRLGHWDCATKMGFDVPRKGTKIRAYSKAKP
HKVITVYKYDVGRMPGAVLDVSPKAFRALGFPTSKGKVAGHYTYKK

Sequences:

>Translated_126_residues
MKKILFSVFVLAGSLLLAFNFAGEASAKTKKVSGYITWYNGVGKIGADGKRLGHWDCATKMGFDVPRKGTKIRAYSKAKP
HKVITVYKYDVGRMPGAVLDVSPKAFRALGFPTSKGKVAGHYTYKK
>Mature_126_residues
MKKILFSVFVLAGSLLLAFNFAGEASAKTKKVSGYITWYNGVGKIGADGKRLGHWDCATKMGFDVPRKGTKIRAYSKAKP
HKVITVYKYDVGRMPGAVLDVSPKAFRALGFPTSKGKVAGHYTYKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009009 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 13764; Mature: 13764

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILFSVFVLAGSLLLAFNFAGEASAKTKKVSGYITWYNGVGKIGADGKRLGHWDCATK
CHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHH
MGFDVPRKGTKIRAYSKAKPHKVITVYKYDVGRMPGAVLDVSPKAFRALGFPTSKGKVAG
CCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEECCHHHHHEECCCCCCCCEEE
HYTYKK
EEEECC
>Mature Secondary Structure
MKKILFSVFVLAGSLLLAFNFAGEASAKTKKVSGYITWYNGVGKIGADGKRLGHWDCATK
CHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHH
MGFDVPRKGTKIRAYSKAKPHKVITVYKYDVGRMPGAVLDVSPKAFRALGFPTSKGKVAG
CCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEECCHHHHHEECCCCCCCCEEE
HYTYKK
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377; 3145906 [H]