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The map label for this gene is yobV [H]

Identifier: 52784454

GI number: 52784454

Start: 653908

End: 654855

Strand: Direct

Name: yobV [H]

Synonym: BLi00652

Alternate gene names: 52784454

Gene position: 653908-654855 (Clockwise)

Preceding gene: 52784452

Following gene: 52784455

Centisome position: 15.49

GC content: 47.15

Gene sequence:

>948_bases
ATGTCTAAAGCGAAACGATTGAATGAAATGATCATGATGGTAAACCGGAAAAAACGATTTACGGTCGGGGAGCTGGCGCG
GGAATTCGGGGTTTCAAAGAGAACGGTTTTAAGGGATTTGCAAGAGCTCAGCGAAATGGGGGTGCCCCTCTATTCTGAAA
CCGGCCCCCACGGAGGATATCAGGTGTTAAATGAAAGGATTCTTCCTCCCATCGCCTTCAGCGAGAACGAAGCGATCTCA
ATCTTCTTTGCGATCGATGCACTGAAGCATTATATATCCCTGCCGTTTGATGCCCAGTACGCATCCATCAAAAAGAAATT
TTATTTAAACCTTTCAGGAGATATCCGGGATGCGATTGACAGTATGAAGGACCGCGTTGCTTTTTATACGCCTTATGAGC
AAACAGACGACATTCCGGTTTTAAAGGTGCTGCTTGAGGCAGCGGTTCAGCAAAAGGTGTTGATCATCGAGTATGAAGCA
AATGGCGCATCAAGCAAGAGGAGCATTCAGCCGATCGGAATCTATGCCAATCAAGGGAAGTGGTATTGCCCGGCTTACTG
TTTTTTAAGAAAGGATTACCGCATATTCAGGTGCGACCGGATCAAGCGGGCCGAGCTTGATGAACATAAGGCACCGATTG
ATTTGTCCGGCCTCAATTTAAAGAACCGTTTTTCGGCTTTGTCCCGGCCAAGGGAGACATTGGAATTATCCGCCGAGCTG
ACAAAAAAGGGAGTAGAGCGGCACGGTTCACTCAAATGGCCGCACCTTGAACTGCATGTAAGAGAAGATGGGTCCGGCGT
GCTGAAAGGCGAAATCGCGCCGAAGGATATCGATTTTTTTGCGGATTATTTCATTTCGTTCGGCCGGGAAGCGGTTATTC
AGAAGCCTTCCAAATTAATTGAAAGGATGAAACGGACATTATCCGACATGCTGAAACAATACGGCTGA

Upstream 100 bases:

>100_bases
TTTCATAGGGGGAACATCTCCTTTTTTTGTTGATCTAAGGAGATTGTATATTATAATGGTGACAACTAATGTCGTGGTTA
AAAAATAATTGGAGGTATTC

Downstream 100 bases:

>100_bases
AATGAAGACTCCGGTATACCGCAGCCTGCGTTTTTCTGCATTTAAAGTTCCGCAAAAAACGCGTGAAGACGCATGTCTTC
TTCATCCTCCAGTTAAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSKAKRLNEMIMMVNRKKRFTVGELAREFGVSKRTVLRDLQELSEMGVPLYSETGPHGGYQVLNERILPPIAFSENEAIS
IFFAIDALKHYISLPFDAQYASIKKKFYLNLSGDIRDAIDSMKDRVAFYTPYEQTDDIPVLKVLLEAAVQQKVLIIEYEA
NGASSKRSIQPIGIYANQGKWYCPAYCFLRKDYRIFRCDRIKRAELDEHKAPIDLSGLNLKNRFSALSRPRETLELSAEL
TKKGVERHGSLKWPHLELHVREDGSGVLKGEIAPKDIDFFADYFISFGREAVIQKPSKLIERMKRTLSDMLKQYG

Sequences:

>Translated_315_residues
MSKAKRLNEMIMMVNRKKRFTVGELAREFGVSKRTVLRDLQELSEMGVPLYSETGPHGGYQVLNERILPPIAFSENEAIS
IFFAIDALKHYISLPFDAQYASIKKKFYLNLSGDIRDAIDSMKDRVAFYTPYEQTDDIPVLKVLLEAAVQQKVLIIEYEA
NGASSKRSIQPIGIYANQGKWYCPAYCFLRKDYRIFRCDRIKRAELDEHKAPIDLSGLNLKNRFSALSRPRETLELSAEL
TKKGVERHGSLKWPHLELHVREDGSGVLKGEIAPKDIDFFADYFISFGREAVIQKPSKLIERMKRTLSDMLKQYG
>Mature_314_residues
SKAKRLNEMIMMVNRKKRFTVGELAREFGVSKRTVLRDLQELSEMGVPLYSETGPHGGYQVLNERILPPIAFSENEAISI
FFAIDALKHYISLPFDAQYASIKKKFYLNLSGDIRDAIDSMKDRVAFYTPYEQTDDIPVLKVLLEAAVQQKVLIIEYEAN
GASSKRSIQPIGIYANQGKWYCPAYCFLRKDYRIFRCDRIKRAELDEHKAPIDLSGLNLKNRFSALSRPRETLELSAELT
KKGVERHGSLKWPHLELHVREDGSGVLKGEIAPKDIDFFADYFISFGREAVIQKPSKLIERMKRTLSDMLKQYG

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 36166; Mature: 36035

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAKRLNEMIMMVNRKKRFTVGELAREFGVSKRTVLRDLQELSEMGVPLYSETGPHGGY
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
QVLNERILPPIAFSENEAISIFFAIDALKHYISLPFDAQYASIKKKFYLNLSGDIRDAID
HHHHHHCCCCEEECCCCEEEEEHHHHHHHHHHCCCCCCHHHHHCEEEEEEECCHHHHHHH
SMKDRVAFYTPYEQTDDIPVLKVLLEAAVQQKVLIIEYEANGASSKRSIQPIGIYANQGK
HHHHCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCC
WYCPAYCFLRKDYRIFRCDRIKRAELDEHKAPIDLSGLNLKNRFSALSRPRETLELSAEL
EECHHHHEECCCCEEEECCCCHHHCCHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
TKKGVERHGSLKWPHLELHVREDGSGVLKGEIAPKDIDFFADYFISFGREAVIQKPSKLI
HHHHHHHCCCCCCCEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHCHHHHHCCHHHHH
ERMKRTLSDMLKQYG
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKAKRLNEMIMMVNRKKRFTVGELAREFGVSKRTVLRDLQELSEMGVPLYSETGPHGGY
CHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
QVLNERILPPIAFSENEAISIFFAIDALKHYISLPFDAQYASIKKKFYLNLSGDIRDAID
HHHHHHCCCCEEECCCCEEEEEHHHHHHHHHHCCCCCCHHHHHCEEEEEEECCHHHHHHH
SMKDRVAFYTPYEQTDDIPVLKVLLEAAVQQKVLIIEYEANGASSKRSIQPIGIYANQGK
HHHHCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCC
WYCPAYCFLRKDYRIFRCDRIKRAELDEHKAPIDLSGLNLKNRFSALSRPRETLELSAEL
EECHHHHEECCCCEEEECCCCHHHCCHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
TKKGVERHGSLKWPHLELHVREDGSGVLKGEIAPKDIDFFADYFISFGREAVIQKPSKLI
HHHHHHHCCCCCCCEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHCHHHHHCCHHHHH
ERMKRTLSDMLKQYG
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]